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Using machine learning to improve our understanding of COVID-19 infection in children

PURPOSE: Children are at elevated risk for COVID-19 (SARS-CoV-2) infection due to their social behaviors. The purpose of this study was to determine if usage of radiological chest X-rays impressions can help predict whether a young adult has COVID-19 infection or not. METHODS: A total of 2572 chest...

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Autores principales: Piparia, Shraddha, Defante, Andrew, Tantisira, Kelan, Ryu, Julie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9931095/
https://www.ncbi.nlm.nih.gov/pubmed/36791067
http://dx.doi.org/10.1371/journal.pone.0281666
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author Piparia, Shraddha
Defante, Andrew
Tantisira, Kelan
Ryu, Julie
author_facet Piparia, Shraddha
Defante, Andrew
Tantisira, Kelan
Ryu, Julie
author_sort Piparia, Shraddha
collection PubMed
description PURPOSE: Children are at elevated risk for COVID-19 (SARS-CoV-2) infection due to their social behaviors. The purpose of this study was to determine if usage of radiological chest X-rays impressions can help predict whether a young adult has COVID-19 infection or not. METHODS: A total of 2572 chest impressions from 721 individuals under the age of 18 years were considered for this study. An ensemble learning method, Random Forest Classifier (RFC), was used for classification of patients suffering from infection. RESULTS: Five RFC models were implemented with incremental features and the best model achieved an F1-score of 0.79 with Area Under the ROC curve as 0.85 using all input features. Hyper parameter tuning and cross validation was performed using grid search cross validation and SHAP model was used to determine feature importance. The radiological features such as pneumonia, small airways disease, and atelectasis (confounded with catheter) were found to be highly associated with predicting the status of COVID-19 infection. CONCLUSIONS: In this sample, radiological X-ray films can predict the status of COVID-19 infection with good accuracy. The multivariate model including symptoms presented around the time of COVID-19 test yielded good prediction score.
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spelling pubmed-99310952023-02-16 Using machine learning to improve our understanding of COVID-19 infection in children Piparia, Shraddha Defante, Andrew Tantisira, Kelan Ryu, Julie PLoS One Research Article PURPOSE: Children are at elevated risk for COVID-19 (SARS-CoV-2) infection due to their social behaviors. The purpose of this study was to determine if usage of radiological chest X-rays impressions can help predict whether a young adult has COVID-19 infection or not. METHODS: A total of 2572 chest impressions from 721 individuals under the age of 18 years were considered for this study. An ensemble learning method, Random Forest Classifier (RFC), was used for classification of patients suffering from infection. RESULTS: Five RFC models were implemented with incremental features and the best model achieved an F1-score of 0.79 with Area Under the ROC curve as 0.85 using all input features. Hyper parameter tuning and cross validation was performed using grid search cross validation and SHAP model was used to determine feature importance. The radiological features such as pneumonia, small airways disease, and atelectasis (confounded with catheter) were found to be highly associated with predicting the status of COVID-19 infection. CONCLUSIONS: In this sample, radiological X-ray films can predict the status of COVID-19 infection with good accuracy. The multivariate model including symptoms presented around the time of COVID-19 test yielded good prediction score. Public Library of Science 2023-02-15 /pmc/articles/PMC9931095/ /pubmed/36791067 http://dx.doi.org/10.1371/journal.pone.0281666 Text en © 2023 Piparia et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Piparia, Shraddha
Defante, Andrew
Tantisira, Kelan
Ryu, Julie
Using machine learning to improve our understanding of COVID-19 infection in children
title Using machine learning to improve our understanding of COVID-19 infection in children
title_full Using machine learning to improve our understanding of COVID-19 infection in children
title_fullStr Using machine learning to improve our understanding of COVID-19 infection in children
title_full_unstemmed Using machine learning to improve our understanding of COVID-19 infection in children
title_short Using machine learning to improve our understanding of COVID-19 infection in children
title_sort using machine learning to improve our understanding of covid-19 infection in children
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9931095/
https://www.ncbi.nlm.nih.gov/pubmed/36791067
http://dx.doi.org/10.1371/journal.pone.0281666
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