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Validation of a deep learning, value-based care model to predict mortality and comorbidities from chest radiographs in COVID-19
We validate a deep learning model predicting comorbidities from frontal chest radiographs (CXRs) in patients with coronavirus disease 2019 (COVID-19) and compare the model’s performance with hierarchical condition category (HCC) and mortality outcomes in COVID-19. The model was trained and tested on...
Autores principales: | , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9931278/ https://www.ncbi.nlm.nih.gov/pubmed/36812559 http://dx.doi.org/10.1371/journal.pdig.0000057 |
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author | Pyrros, Ayis Rodriguez Fernandez, Jorge Borstelmann, Stephen M. Flanders, Adam Wenzke, Daniel Hart, Eric Horowitz, Jeanne M. Nikolaidis, Paul Willis, Melinda Chen, Andrew Cole, Patrick Siddiqui, Nasir Muzaffar, Momin Muzaffar, Nadir McVean, Jennifer Menchaca, Martha Katsaggelos, Aggelos K. Koyejo, Sanmi Galanter, William |
author_facet | Pyrros, Ayis Rodriguez Fernandez, Jorge Borstelmann, Stephen M. Flanders, Adam Wenzke, Daniel Hart, Eric Horowitz, Jeanne M. Nikolaidis, Paul Willis, Melinda Chen, Andrew Cole, Patrick Siddiqui, Nasir Muzaffar, Momin Muzaffar, Nadir McVean, Jennifer Menchaca, Martha Katsaggelos, Aggelos K. Koyejo, Sanmi Galanter, William |
author_sort | Pyrros, Ayis |
collection | PubMed |
description | We validate a deep learning model predicting comorbidities from frontal chest radiographs (CXRs) in patients with coronavirus disease 2019 (COVID-19) and compare the model’s performance with hierarchical condition category (HCC) and mortality outcomes in COVID-19. The model was trained and tested on 14,121 ambulatory frontal CXRs from 2010 to 2019 at a single institution, modeling select comorbidities using the value-based Medicare Advantage HCC Risk Adjustment Model. Sex, age, HCC codes, and risk adjustment factor (RAF) score were used. The model was validated on frontal CXRs from 413 ambulatory patients with COVID-19 (internal cohort) and on initial frontal CXRs from 487 COVID-19 hospitalized patients (external cohort). The discriminatory ability of the model was assessed using receiver operating characteristic (ROC) curves compared to the HCC data from electronic health records, and predicted age and RAF score were compared using correlation coefficient and absolute mean error. The model predictions were used as covariables in logistic regression models to evaluate the prediction of mortality in the external cohort. Predicted comorbidities from frontal CXRs, including diabetes with chronic complications, obesity, congestive heart failure, arrhythmias, vascular disease, and chronic obstructive pulmonary disease, had a total area under ROC curve (AUC) of 0.85 (95% CI: 0.85–0.86). The ROC AUC of predicted mortality for the model was 0.84 (95% CI,0.79–0.88) for the combined cohorts. This model using only frontal CXRs predicted select comorbidities and RAF score in both internal ambulatory and external hospitalized COVID-19 cohorts and was discriminatory of mortality, supporting its potential use in clinical decision making. |
format | Online Article Text |
id | pubmed-9931278 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-99312782023-02-16 Validation of a deep learning, value-based care model to predict mortality and comorbidities from chest radiographs in COVID-19 Pyrros, Ayis Rodriguez Fernandez, Jorge Borstelmann, Stephen M. Flanders, Adam Wenzke, Daniel Hart, Eric Horowitz, Jeanne M. Nikolaidis, Paul Willis, Melinda Chen, Andrew Cole, Patrick Siddiqui, Nasir Muzaffar, Momin Muzaffar, Nadir McVean, Jennifer Menchaca, Martha Katsaggelos, Aggelos K. Koyejo, Sanmi Galanter, William PLOS Digit Health Research Article We validate a deep learning model predicting comorbidities from frontal chest radiographs (CXRs) in patients with coronavirus disease 2019 (COVID-19) and compare the model’s performance with hierarchical condition category (HCC) and mortality outcomes in COVID-19. The model was trained and tested on 14,121 ambulatory frontal CXRs from 2010 to 2019 at a single institution, modeling select comorbidities using the value-based Medicare Advantage HCC Risk Adjustment Model. Sex, age, HCC codes, and risk adjustment factor (RAF) score were used. The model was validated on frontal CXRs from 413 ambulatory patients with COVID-19 (internal cohort) and on initial frontal CXRs from 487 COVID-19 hospitalized patients (external cohort). The discriminatory ability of the model was assessed using receiver operating characteristic (ROC) curves compared to the HCC data from electronic health records, and predicted age and RAF score were compared using correlation coefficient and absolute mean error. The model predictions were used as covariables in logistic regression models to evaluate the prediction of mortality in the external cohort. Predicted comorbidities from frontal CXRs, including diabetes with chronic complications, obesity, congestive heart failure, arrhythmias, vascular disease, and chronic obstructive pulmonary disease, had a total area under ROC curve (AUC) of 0.85 (95% CI: 0.85–0.86). The ROC AUC of predicted mortality for the model was 0.84 (95% CI,0.79–0.88) for the combined cohorts. This model using only frontal CXRs predicted select comorbidities and RAF score in both internal ambulatory and external hospitalized COVID-19 cohorts and was discriminatory of mortality, supporting its potential use in clinical decision making. Public Library of Science 2022-08-01 /pmc/articles/PMC9931278/ /pubmed/36812559 http://dx.doi.org/10.1371/journal.pdig.0000057 Text en © 2022 Pyrros et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Pyrros, Ayis Rodriguez Fernandez, Jorge Borstelmann, Stephen M. Flanders, Adam Wenzke, Daniel Hart, Eric Horowitz, Jeanne M. Nikolaidis, Paul Willis, Melinda Chen, Andrew Cole, Patrick Siddiqui, Nasir Muzaffar, Momin Muzaffar, Nadir McVean, Jennifer Menchaca, Martha Katsaggelos, Aggelos K. Koyejo, Sanmi Galanter, William Validation of a deep learning, value-based care model to predict mortality and comorbidities from chest radiographs in COVID-19 |
title | Validation of a deep learning, value-based care model to predict mortality and comorbidities from chest radiographs in COVID-19 |
title_full | Validation of a deep learning, value-based care model to predict mortality and comorbidities from chest radiographs in COVID-19 |
title_fullStr | Validation of a deep learning, value-based care model to predict mortality and comorbidities from chest radiographs in COVID-19 |
title_full_unstemmed | Validation of a deep learning, value-based care model to predict mortality and comorbidities from chest radiographs in COVID-19 |
title_short | Validation of a deep learning, value-based care model to predict mortality and comorbidities from chest radiographs in COVID-19 |
title_sort | validation of a deep learning, value-based care model to predict mortality and comorbidities from chest radiographs in covid-19 |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9931278/ https://www.ncbi.nlm.nih.gov/pubmed/36812559 http://dx.doi.org/10.1371/journal.pdig.0000057 |
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