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A multiple instance learning approach for detecting COVID-19 in peripheral blood smears
A wide variety of diseases are commonly diagnosed via the visual examination of cell morphology within a peripheral blood smear. For certain diseases, such as COVID-19, morphological impact across the multitude of blood cell types is still poorly understood. In this paper, we present a multiple inst...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9931330/ https://www.ncbi.nlm.nih.gov/pubmed/36812577 http://dx.doi.org/10.1371/journal.pdig.0000078 |
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author | Cooke, Colin L. Kim, Kanghyun Xu, Shiqi Chaware, Amey Yao, Xing Yang, Xi Neff, Jadee Pittman, Patricia McCall, Chad Glass, Carolyn Jiang, Xiaoyin Sara Horstmeyer, Roarke |
author_facet | Cooke, Colin L. Kim, Kanghyun Xu, Shiqi Chaware, Amey Yao, Xing Yang, Xi Neff, Jadee Pittman, Patricia McCall, Chad Glass, Carolyn Jiang, Xiaoyin Sara Horstmeyer, Roarke |
author_sort | Cooke, Colin L. |
collection | PubMed |
description | A wide variety of diseases are commonly diagnosed via the visual examination of cell morphology within a peripheral blood smear. For certain diseases, such as COVID-19, morphological impact across the multitude of blood cell types is still poorly understood. In this paper, we present a multiple instance learning-based approach to aggregate high-resolution morphological information across many blood cells and cell types to automatically diagnose disease at a per-patient level. We integrated image and diagnostic information from across 236 patients to demonstrate not only that there is a significant link between blood and a patient’s COVID-19 infection status, but also that novel machine learning approaches offer a powerful and scalable means to analyze peripheral blood smears. Our results both backup and enhance hematological findings relating blood cell morphology to COVID-19, and offer a high diagnostic efficacy; with a 79% accuracy and a ROC-AUC of 0.90. |
format | Online Article Text |
id | pubmed-9931330 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-99313302023-02-16 A multiple instance learning approach for detecting COVID-19 in peripheral blood smears Cooke, Colin L. Kim, Kanghyun Xu, Shiqi Chaware, Amey Yao, Xing Yang, Xi Neff, Jadee Pittman, Patricia McCall, Chad Glass, Carolyn Jiang, Xiaoyin Sara Horstmeyer, Roarke PLOS Digit Health Research Article A wide variety of diseases are commonly diagnosed via the visual examination of cell morphology within a peripheral blood smear. For certain diseases, such as COVID-19, morphological impact across the multitude of blood cell types is still poorly understood. In this paper, we present a multiple instance learning-based approach to aggregate high-resolution morphological information across many blood cells and cell types to automatically diagnose disease at a per-patient level. We integrated image and diagnostic information from across 236 patients to demonstrate not only that there is a significant link between blood and a patient’s COVID-19 infection status, but also that novel machine learning approaches offer a powerful and scalable means to analyze peripheral blood smears. Our results both backup and enhance hematological findings relating blood cell morphology to COVID-19, and offer a high diagnostic efficacy; with a 79% accuracy and a ROC-AUC of 0.90. Public Library of Science 2022-08-19 /pmc/articles/PMC9931330/ /pubmed/36812577 http://dx.doi.org/10.1371/journal.pdig.0000078 Text en © 2022 Cooke et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Cooke, Colin L. Kim, Kanghyun Xu, Shiqi Chaware, Amey Yao, Xing Yang, Xi Neff, Jadee Pittman, Patricia McCall, Chad Glass, Carolyn Jiang, Xiaoyin Sara Horstmeyer, Roarke A multiple instance learning approach for detecting COVID-19 in peripheral blood smears |
title | A multiple instance learning approach for detecting COVID-19 in peripheral blood smears |
title_full | A multiple instance learning approach for detecting COVID-19 in peripheral blood smears |
title_fullStr | A multiple instance learning approach for detecting COVID-19 in peripheral blood smears |
title_full_unstemmed | A multiple instance learning approach for detecting COVID-19 in peripheral blood smears |
title_short | A multiple instance learning approach for detecting COVID-19 in peripheral blood smears |
title_sort | multiple instance learning approach for detecting covid-19 in peripheral blood smears |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9931330/ https://www.ncbi.nlm.nih.gov/pubmed/36812577 http://dx.doi.org/10.1371/journal.pdig.0000078 |
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