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Engineering circular RNA for enhanced protein production

Circular RNAs (circRNAs) are stable and prevalent RNAs in eukaryotic cells that arise from back-splicing. Synthetic circRNAs and some endogenous circRNAs can encode proteins, raising the promise of circRNA as a platform for gene expression. In this study, we developed a systematic approach for rapid...

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Autores principales: Chen, Robert, Wang, Sean K., Belk, Julia A., Amaya, Laura, Li, Zhijian, Cardenas, Angel, Abe, Brian T., Chen, Chun-Kan, Wender, Paul A., Chang, Howard Y.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group US 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9931579/
https://www.ncbi.nlm.nih.gov/pubmed/35851375
http://dx.doi.org/10.1038/s41587-022-01393-0
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author Chen, Robert
Wang, Sean K.
Belk, Julia A.
Amaya, Laura
Li, Zhijian
Cardenas, Angel
Abe, Brian T.
Chen, Chun-Kan
Wender, Paul A.
Chang, Howard Y.
author_facet Chen, Robert
Wang, Sean K.
Belk, Julia A.
Amaya, Laura
Li, Zhijian
Cardenas, Angel
Abe, Brian T.
Chen, Chun-Kan
Wender, Paul A.
Chang, Howard Y.
author_sort Chen, Robert
collection PubMed
description Circular RNAs (circRNAs) are stable and prevalent RNAs in eukaryotic cells that arise from back-splicing. Synthetic circRNAs and some endogenous circRNAs can encode proteins, raising the promise of circRNA as a platform for gene expression. In this study, we developed a systematic approach for rapid assembly and testing of features that affect protein production from synthetic circRNAs. To maximize circRNA translation, we optimized five elements: vector topology, 5′ and 3′ untranslated regions, internal ribosome entry sites and synthetic aptamers recruiting translation initiation machinery. Together, these design principles improve circRNA protein yields by several hundred-fold, provide increased translation over messenger RNA in vitro, provide more durable translation in vivo and are generalizable across multiple transgenes.
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spelling pubmed-99315792023-02-17 Engineering circular RNA for enhanced protein production Chen, Robert Wang, Sean K. Belk, Julia A. Amaya, Laura Li, Zhijian Cardenas, Angel Abe, Brian T. Chen, Chun-Kan Wender, Paul A. Chang, Howard Y. Nat Biotechnol Article Circular RNAs (circRNAs) are stable and prevalent RNAs in eukaryotic cells that arise from back-splicing. Synthetic circRNAs and some endogenous circRNAs can encode proteins, raising the promise of circRNA as a platform for gene expression. In this study, we developed a systematic approach for rapid assembly and testing of features that affect protein production from synthetic circRNAs. To maximize circRNA translation, we optimized five elements: vector topology, 5′ and 3′ untranslated regions, internal ribosome entry sites and synthetic aptamers recruiting translation initiation machinery. Together, these design principles improve circRNA protein yields by several hundred-fold, provide increased translation over messenger RNA in vitro, provide more durable translation in vivo and are generalizable across multiple transgenes. Nature Publishing Group US 2022-07-18 2023 /pmc/articles/PMC9931579/ /pubmed/35851375 http://dx.doi.org/10.1038/s41587-022-01393-0 Text en © The Author(s) 2022, corrected publication 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Chen, Robert
Wang, Sean K.
Belk, Julia A.
Amaya, Laura
Li, Zhijian
Cardenas, Angel
Abe, Brian T.
Chen, Chun-Kan
Wender, Paul A.
Chang, Howard Y.
Engineering circular RNA for enhanced protein production
title Engineering circular RNA for enhanced protein production
title_full Engineering circular RNA for enhanced protein production
title_fullStr Engineering circular RNA for enhanced protein production
title_full_unstemmed Engineering circular RNA for enhanced protein production
title_short Engineering circular RNA for enhanced protein production
title_sort engineering circular rna for enhanced protein production
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9931579/
https://www.ncbi.nlm.nih.gov/pubmed/35851375
http://dx.doi.org/10.1038/s41587-022-01393-0
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