Cargando…

Cancer detection for small-size and ambiguous tumors based on semantic FPN and transformer

Early detection of tumors has great significance for formative detection and determination of treatment plans. However, cancer detection remains a challenging task due to the interference of diseased tissue, the diversity of mass scales, and the ambiguity of tumor boundaries. It is difficult to extr...

Descripción completa

Detalles Bibliográficos
Autores principales: He, Jingzhen, Wang, Jing, Han, Zeyu, Li, Baojun, Lv, Mei, Shi, Yunfeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9934456/
https://www.ncbi.nlm.nih.gov/pubmed/36795663
http://dx.doi.org/10.1371/journal.pone.0275194
_version_ 1784889890822946816
author He, Jingzhen
Wang, Jing
Han, Zeyu
Li, Baojun
Lv, Mei
Shi, Yunfeng
author_facet He, Jingzhen
Wang, Jing
Han, Zeyu
Li, Baojun
Lv, Mei
Shi, Yunfeng
author_sort He, Jingzhen
collection PubMed
description Early detection of tumors has great significance for formative detection and determination of treatment plans. However, cancer detection remains a challenging task due to the interference of diseased tissue, the diversity of mass scales, and the ambiguity of tumor boundaries. It is difficult to extract the features of small-sized tumors and tumor boundaries, so semantic information of high-level feature maps is needed to enrich the regional features and local attention features of tumors. To solve the problems of small tumor objects and lack of contextual features, this paper proposes a novel Semantic Pyramid Network with a Transformer Self-attention, named SPN-TS, for tumor detection. Specifically, the paper first designs a new Feature Pyramid Network in the feature extraction stage. It changes the traditional cross-layer connection scheme and focuses on enriching the features of small-sized tumor regions. Then, we introduce the transformer attention mechanism into the framework to learn the local feature of tumor boundaries. Extensive experimental evaluations were performed on the publicly available CBIS-DDSM dataset, which is a Curated Breast Imaging Subset of the Digital Database for Screening Mammography. The proposed method achieved better performance in these models, achieving 93.26% sensitivity, 95.26% specificity, 96.78% accuracy, and 87.27% Matthews Correlation Coefficient (MCC) value, respectively. The method can achieve the best detection performance by effectively solving the difficulties of small objects and boundaries ambiguity. The algorithm can further promote the detection of other diseases in the future, and also provide algorithmic references for the general object detection field.
format Online
Article
Text
id pubmed-9934456
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-99344562023-02-17 Cancer detection for small-size and ambiguous tumors based on semantic FPN and transformer He, Jingzhen Wang, Jing Han, Zeyu Li, Baojun Lv, Mei Shi, Yunfeng PLoS One Research Article Early detection of tumors has great significance for formative detection and determination of treatment plans. However, cancer detection remains a challenging task due to the interference of diseased tissue, the diversity of mass scales, and the ambiguity of tumor boundaries. It is difficult to extract the features of small-sized tumors and tumor boundaries, so semantic information of high-level feature maps is needed to enrich the regional features and local attention features of tumors. To solve the problems of small tumor objects and lack of contextual features, this paper proposes a novel Semantic Pyramid Network with a Transformer Self-attention, named SPN-TS, for tumor detection. Specifically, the paper first designs a new Feature Pyramid Network in the feature extraction stage. It changes the traditional cross-layer connection scheme and focuses on enriching the features of small-sized tumor regions. Then, we introduce the transformer attention mechanism into the framework to learn the local feature of tumor boundaries. Extensive experimental evaluations were performed on the publicly available CBIS-DDSM dataset, which is a Curated Breast Imaging Subset of the Digital Database for Screening Mammography. The proposed method achieved better performance in these models, achieving 93.26% sensitivity, 95.26% specificity, 96.78% accuracy, and 87.27% Matthews Correlation Coefficient (MCC) value, respectively. The method can achieve the best detection performance by effectively solving the difficulties of small objects and boundaries ambiguity. The algorithm can further promote the detection of other diseases in the future, and also provide algorithmic references for the general object detection field. Public Library of Science 2023-02-16 /pmc/articles/PMC9934456/ /pubmed/36795663 http://dx.doi.org/10.1371/journal.pone.0275194 Text en © 2023 He et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
He, Jingzhen
Wang, Jing
Han, Zeyu
Li, Baojun
Lv, Mei
Shi, Yunfeng
Cancer detection for small-size and ambiguous tumors based on semantic FPN and transformer
title Cancer detection for small-size and ambiguous tumors based on semantic FPN and transformer
title_full Cancer detection for small-size and ambiguous tumors based on semantic FPN and transformer
title_fullStr Cancer detection for small-size and ambiguous tumors based on semantic FPN and transformer
title_full_unstemmed Cancer detection for small-size and ambiguous tumors based on semantic FPN and transformer
title_short Cancer detection for small-size and ambiguous tumors based on semantic FPN and transformer
title_sort cancer detection for small-size and ambiguous tumors based on semantic fpn and transformer
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9934456/
https://www.ncbi.nlm.nih.gov/pubmed/36795663
http://dx.doi.org/10.1371/journal.pone.0275194
work_keys_str_mv AT hejingzhen cancerdetectionforsmallsizeandambiguoustumorsbasedonsemanticfpnandtransformer
AT wangjing cancerdetectionforsmallsizeandambiguoustumorsbasedonsemanticfpnandtransformer
AT hanzeyu cancerdetectionforsmallsizeandambiguoustumorsbasedonsemanticfpnandtransformer
AT libaojun cancerdetectionforsmallsizeandambiguoustumorsbasedonsemanticfpnandtransformer
AT lvmei cancerdetectionforsmallsizeandambiguoustumorsbasedonsemanticfpnandtransformer
AT shiyunfeng cancerdetectionforsmallsizeandambiguoustumorsbasedonsemanticfpnandtransformer