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Fast myocardial perfusion SPECT denoising using an attention-guided generative adversarial network

PURPOSE: Deep learning-based denoising is promising for myocardial perfusion (MP) SPECT. However, conventional convolutional neural network (CNN)-based methods use fixed-sized convolutional kernels to convolute one region within the receptive field at a time, which would be ineffective for learning...

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Autores principales: Sun, Jingzhang, Yang, Bang-Hung, Li, Chien-Ying, Du, Yu, Liu, Yi-Hwa, Wu, Tung-Hsin, Mok, Greta S. P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9935600/
https://www.ncbi.nlm.nih.gov/pubmed/36817784
http://dx.doi.org/10.3389/fmed.2023.1083413
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author Sun, Jingzhang
Yang, Bang-Hung
Li, Chien-Ying
Du, Yu
Liu, Yi-Hwa
Wu, Tung-Hsin
Mok, Greta S. P.
author_facet Sun, Jingzhang
Yang, Bang-Hung
Li, Chien-Ying
Du, Yu
Liu, Yi-Hwa
Wu, Tung-Hsin
Mok, Greta S. P.
author_sort Sun, Jingzhang
collection PubMed
description PURPOSE: Deep learning-based denoising is promising for myocardial perfusion (MP) SPECT. However, conventional convolutional neural network (CNN)-based methods use fixed-sized convolutional kernels to convolute one region within the receptive field at a time, which would be ineffective for learning the feature dependencies across large regions. The attention mechanism (Att) is able to learn the relationships between the local receptive field and other voxels in the image. In this study, we propose a 3D attention-guided generative adversarial network (AttGAN) for denoising fast MP-SPECT images. METHODS: Fifty patients who underwent 1184 MBq (99m)Tc-sestamibi stress SPECT/CT scan were retrospectively recruited. Sixty projections were acquired over 180° and the acquisition time was 10 s/view for the full time (FT) mode. Fast MP-SPECT projection images (1 s to 7 s) were generated from the FT list mode data. We further incorporated binary patient defect information (0 = without defect, 1 = with defect) into AttGAN (AttGAN-def). AttGAN, AttGAN-def, cGAN, and Unet were implemented using Tensorflow with the Adam optimizer running up to 400 epochs. FT and fast MP-SPECT projection pairs of 35 patients were used for training the networks for each acquisition time, while 5 and 10 patients were applied for validation and testing. Five-fold cross-validation was performed and data for all 50 patients were tested. Voxel-based error indices, joint histogram, linear regression, and perfusion defect size (PDS) were analyzed. RESULTS: All quantitative indices of AttGAN-based networks are superior to cGAN and Unet on all acquisition time images. AttGAN-def further improves AttGAN performance. The mean absolute error of PDS by AttcGAN-def was 1.60 on acquisition time of 1 s/prj, as compared to 2.36, 2.76, and 3.02 by AttGAN, cGAN, and Unet. CONCLUSION: Denoising based on AttGAN is superior to conventional CNN-based networks for MP-SPECT.
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spelling pubmed-99356002023-02-18 Fast myocardial perfusion SPECT denoising using an attention-guided generative adversarial network Sun, Jingzhang Yang, Bang-Hung Li, Chien-Ying Du, Yu Liu, Yi-Hwa Wu, Tung-Hsin Mok, Greta S. P. Front Med (Lausanne) Medicine PURPOSE: Deep learning-based denoising is promising for myocardial perfusion (MP) SPECT. However, conventional convolutional neural network (CNN)-based methods use fixed-sized convolutional kernels to convolute one region within the receptive field at a time, which would be ineffective for learning the feature dependencies across large regions. The attention mechanism (Att) is able to learn the relationships between the local receptive field and other voxels in the image. In this study, we propose a 3D attention-guided generative adversarial network (AttGAN) for denoising fast MP-SPECT images. METHODS: Fifty patients who underwent 1184 MBq (99m)Tc-sestamibi stress SPECT/CT scan were retrospectively recruited. Sixty projections were acquired over 180° and the acquisition time was 10 s/view for the full time (FT) mode. Fast MP-SPECT projection images (1 s to 7 s) were generated from the FT list mode data. We further incorporated binary patient defect information (0 = without defect, 1 = with defect) into AttGAN (AttGAN-def). AttGAN, AttGAN-def, cGAN, and Unet were implemented using Tensorflow with the Adam optimizer running up to 400 epochs. FT and fast MP-SPECT projection pairs of 35 patients were used for training the networks for each acquisition time, while 5 and 10 patients were applied for validation and testing. Five-fold cross-validation was performed and data for all 50 patients were tested. Voxel-based error indices, joint histogram, linear regression, and perfusion defect size (PDS) were analyzed. RESULTS: All quantitative indices of AttGAN-based networks are superior to cGAN and Unet on all acquisition time images. AttGAN-def further improves AttGAN performance. The mean absolute error of PDS by AttcGAN-def was 1.60 on acquisition time of 1 s/prj, as compared to 2.36, 2.76, and 3.02 by AttGAN, cGAN, and Unet. CONCLUSION: Denoising based on AttGAN is superior to conventional CNN-based networks for MP-SPECT. Frontiers Media S.A. 2023-02-03 /pmc/articles/PMC9935600/ /pubmed/36817784 http://dx.doi.org/10.3389/fmed.2023.1083413 Text en Copyright © 2023 Sun, Yang, Li, Du, Liu, Wu and Mok. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Medicine
Sun, Jingzhang
Yang, Bang-Hung
Li, Chien-Ying
Du, Yu
Liu, Yi-Hwa
Wu, Tung-Hsin
Mok, Greta S. P.
Fast myocardial perfusion SPECT denoising using an attention-guided generative adversarial network
title Fast myocardial perfusion SPECT denoising using an attention-guided generative adversarial network
title_full Fast myocardial perfusion SPECT denoising using an attention-guided generative adversarial network
title_fullStr Fast myocardial perfusion SPECT denoising using an attention-guided generative adversarial network
title_full_unstemmed Fast myocardial perfusion SPECT denoising using an attention-guided generative adversarial network
title_short Fast myocardial perfusion SPECT denoising using an attention-guided generative adversarial network
title_sort fast myocardial perfusion spect denoising using an attention-guided generative adversarial network
topic Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9935600/
https://www.ncbi.nlm.nih.gov/pubmed/36817784
http://dx.doi.org/10.3389/fmed.2023.1083413
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