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Bifurcation matching for consistent cerebral vessel labeling in CTA of stroke patients
PURPOSE: Vessel labeling is a prerequisite for comparing cerebral vasculature across patients, e.g., for straightened vessel examination or for localization. Extracting vessels from computed tomography angiography scans may come with a trade-off in segmentation accuracy. Vessels might be neglected o...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9939487/ https://www.ncbi.nlm.nih.gov/pubmed/36181631 http://dx.doi.org/10.1007/s11548-022-02750-9 |
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author | Rist, Leonhard Taubmann, Oliver Thamm, Florian Ditt, Hendrik Sühling, Michael Maier, Andreas |
author_facet | Rist, Leonhard Taubmann, Oliver Thamm, Florian Ditt, Hendrik Sühling, Michael Maier, Andreas |
author_sort | Rist, Leonhard |
collection | PubMed |
description | PURPOSE: Vessel labeling is a prerequisite for comparing cerebral vasculature across patients, e.g., for straightened vessel examination or for localization. Extracting vessels from computed tomography angiography scans may come with a trade-off in segmentation accuracy. Vessels might be neglected or artificially created, increasing the difficulty of labeling. Related work mainly focuses on magnetic resonance angiography without stroke and uses trainable approaches requiring costly labels. METHODS: We present a robust method to identify major arteries and bifurcations in cerebrovascular models generated from existing segmentations. To localize bifurcations of the Circle of Willis, candidate paths for the adjacent vessels of interest are identified using registered landmarks. From those paths, the optimal ones are extracted by recursively maximizing an objective function for all adjacent vessels starting from a bifurcation to avoid erroneous paths and compensate for stroke. RESULTS: In 100 CTA stroke data sets for evaluation, 6 bifurcation locations are placed correctly in 85% of cases; 92.5% when allowing a margin of 5 mm. On average, 14 vessels of interest are found in 90% of the cases and traced correctly end-to-end in 73.5%. The baseline achieves similar detection rates but only 35.5% of the arteries are traced in full. CONCLUSION: Formulating the vessel labeling process as a maximization task for bifurcation matching can vastly improve accurate vessel tracing. The proposed algorithm only uses simple features and does not require expensive training data. |
format | Online Article Text |
id | pubmed-9939487 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-99394872023-02-21 Bifurcation matching for consistent cerebral vessel labeling in CTA of stroke patients Rist, Leonhard Taubmann, Oliver Thamm, Florian Ditt, Hendrik Sühling, Michael Maier, Andreas Int J Comput Assist Radiol Surg Original Article PURPOSE: Vessel labeling is a prerequisite for comparing cerebral vasculature across patients, e.g., for straightened vessel examination or for localization. Extracting vessels from computed tomography angiography scans may come with a trade-off in segmentation accuracy. Vessels might be neglected or artificially created, increasing the difficulty of labeling. Related work mainly focuses on magnetic resonance angiography without stroke and uses trainable approaches requiring costly labels. METHODS: We present a robust method to identify major arteries and bifurcations in cerebrovascular models generated from existing segmentations. To localize bifurcations of the Circle of Willis, candidate paths for the adjacent vessels of interest are identified using registered landmarks. From those paths, the optimal ones are extracted by recursively maximizing an objective function for all adjacent vessels starting from a bifurcation to avoid erroneous paths and compensate for stroke. RESULTS: In 100 CTA stroke data sets for evaluation, 6 bifurcation locations are placed correctly in 85% of cases; 92.5% when allowing a margin of 5 mm. On average, 14 vessels of interest are found in 90% of the cases and traced correctly end-to-end in 73.5%. The baseline achieves similar detection rates but only 35.5% of the arteries are traced in full. CONCLUSION: Formulating the vessel labeling process as a maximization task for bifurcation matching can vastly improve accurate vessel tracing. The proposed algorithm only uses simple features and does not require expensive training data. Springer International Publishing 2022-10-01 2023 /pmc/articles/PMC9939487/ /pubmed/36181631 http://dx.doi.org/10.1007/s11548-022-02750-9 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Original Article Rist, Leonhard Taubmann, Oliver Thamm, Florian Ditt, Hendrik Sühling, Michael Maier, Andreas Bifurcation matching for consistent cerebral vessel labeling in CTA of stroke patients |
title | Bifurcation matching for consistent cerebral vessel labeling in CTA of stroke patients |
title_full | Bifurcation matching for consistent cerebral vessel labeling in CTA of stroke patients |
title_fullStr | Bifurcation matching for consistent cerebral vessel labeling in CTA of stroke patients |
title_full_unstemmed | Bifurcation matching for consistent cerebral vessel labeling in CTA of stroke patients |
title_short | Bifurcation matching for consistent cerebral vessel labeling in CTA of stroke patients |
title_sort | bifurcation matching for consistent cerebral vessel labeling in cta of stroke patients |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9939487/ https://www.ncbi.nlm.nih.gov/pubmed/36181631 http://dx.doi.org/10.1007/s11548-022-02750-9 |
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