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A reinterpretation of the gap fraction of tree crowns from the perspectives of computer graphics and porous media theory

The gap fraction (GF) of vegetative canopies is an important property related to the contained bulk of reproductive elements and woody facets within the tree crown volume. This work was developed from the perspectives of porous media theory and computer graphics techniques, considering the vegetativ...

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Autores principales: Zhu, Yunfeng, Li, Dongni, Fan, Jiangchuan, Zhang, Huaiqing, Eichhorn, Markus P., Wang, Xiangjun, Yun, Ting
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9939530/
https://www.ncbi.nlm.nih.gov/pubmed/36814756
http://dx.doi.org/10.3389/fpls.2023.1109443
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author Zhu, Yunfeng
Li, Dongni
Fan, Jiangchuan
Zhang, Huaiqing
Eichhorn, Markus P.
Wang, Xiangjun
Yun, Ting
author_facet Zhu, Yunfeng
Li, Dongni
Fan, Jiangchuan
Zhang, Huaiqing
Eichhorn, Markus P.
Wang, Xiangjun
Yun, Ting
author_sort Zhu, Yunfeng
collection PubMed
description The gap fraction (GF) of vegetative canopies is an important property related to the contained bulk of reproductive elements and woody facets within the tree crown volume. This work was developed from the perspectives of porous media theory and computer graphics techniques, considering the vegetative elements in the canopy as a solid matrix and treating the gaps between them as pores to guide volume-based GF(vol) calculations. Woody components and individual leaves were extracted from terrestrial laser scanning data. The concept of equivalent leaf thickness describing the degrees of leaf curling and drooping was proposed to construct hexagonal prisms properly enclosing the scanned points of each leaf, and cylinder models were adopted to fit each branch segment, enabling the calculation of the equivalent leaf and branch volumes within the crown. Finally, the volume-based GF(vol) of the tree crown following the definition of the void fraction in porous media theory was calculated as one minus the ratio of the total plant leaf and branch volume to the canopy volume. This approach was tested on five tree species and a forest plot with variable canopy architecture, yielding an estimated maximum volume-based GF(vol) of 0.985 for a small crepe myrtle and a minimal volume-based GF(vol) of 0.953 for a sakura tree. The 3D morphology of each compositional element in the tree canopy was geometrically defined and the canopy was considered a porous structure to conduct GF(vol) calculations based on multidisciplinary theory.
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spelling pubmed-99395302023-02-21 A reinterpretation of the gap fraction of tree crowns from the perspectives of computer graphics and porous media theory Zhu, Yunfeng Li, Dongni Fan, Jiangchuan Zhang, Huaiqing Eichhorn, Markus P. Wang, Xiangjun Yun, Ting Front Plant Sci Plant Science The gap fraction (GF) of vegetative canopies is an important property related to the contained bulk of reproductive elements and woody facets within the tree crown volume. This work was developed from the perspectives of porous media theory and computer graphics techniques, considering the vegetative elements in the canopy as a solid matrix and treating the gaps between them as pores to guide volume-based GF(vol) calculations. Woody components and individual leaves were extracted from terrestrial laser scanning data. The concept of equivalent leaf thickness describing the degrees of leaf curling and drooping was proposed to construct hexagonal prisms properly enclosing the scanned points of each leaf, and cylinder models were adopted to fit each branch segment, enabling the calculation of the equivalent leaf and branch volumes within the crown. Finally, the volume-based GF(vol) of the tree crown following the definition of the void fraction in porous media theory was calculated as one minus the ratio of the total plant leaf and branch volume to the canopy volume. This approach was tested on five tree species and a forest plot with variable canopy architecture, yielding an estimated maximum volume-based GF(vol) of 0.985 for a small crepe myrtle and a minimal volume-based GF(vol) of 0.953 for a sakura tree. The 3D morphology of each compositional element in the tree canopy was geometrically defined and the canopy was considered a porous structure to conduct GF(vol) calculations based on multidisciplinary theory. Frontiers Media S.A. 2023-02-06 /pmc/articles/PMC9939530/ /pubmed/36814756 http://dx.doi.org/10.3389/fpls.2023.1109443 Text en Copyright © 2023 Zhu, Li, Fan, Zhang, Eichhorn, Wang and Yun https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Zhu, Yunfeng
Li, Dongni
Fan, Jiangchuan
Zhang, Huaiqing
Eichhorn, Markus P.
Wang, Xiangjun
Yun, Ting
A reinterpretation of the gap fraction of tree crowns from the perspectives of computer graphics and porous media theory
title A reinterpretation of the gap fraction of tree crowns from the perspectives of computer graphics and porous media theory
title_full A reinterpretation of the gap fraction of tree crowns from the perspectives of computer graphics and porous media theory
title_fullStr A reinterpretation of the gap fraction of tree crowns from the perspectives of computer graphics and porous media theory
title_full_unstemmed A reinterpretation of the gap fraction of tree crowns from the perspectives of computer graphics and porous media theory
title_short A reinterpretation of the gap fraction of tree crowns from the perspectives of computer graphics and porous media theory
title_sort reinterpretation of the gap fraction of tree crowns from the perspectives of computer graphics and porous media theory
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9939530/
https://www.ncbi.nlm.nih.gov/pubmed/36814756
http://dx.doi.org/10.3389/fpls.2023.1109443
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