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Stochastic processes drive the soil fungal communities in a developing mid-channel bar
Intricate associations between rhizosphere microbial communities and plants play a critical role in developing and maintaining of soil ecological functioning. Therefore, understanding the assembly patterns of rhizosphere microbes in different plants and their responses to environmental changes is of...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9939660/ https://www.ncbi.nlm.nih.gov/pubmed/36814566 http://dx.doi.org/10.3389/fmicb.2023.1104297 |
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author | Ye, Fei Hong, Yiguo Yi, Xuemei Sun, Zhaohong Wu, Jiapeng Wang, Yu |
author_facet | Ye, Fei Hong, Yiguo Yi, Xuemei Sun, Zhaohong Wu, Jiapeng Wang, Yu |
author_sort | Ye, Fei |
collection | PubMed |
description | Intricate associations between rhizosphere microbial communities and plants play a critical role in developing and maintaining of soil ecological functioning. Therefore, understanding the assembly patterns of rhizosphere microbes in different plants and their responses to environmental changes is of great ecological implications for dynamic habitats. In this study, a developing mid-channel bar was employed in the Yangtze River to explore the assembly processes of rhizosphere fungal communities among various plant species using high-throughput sequencing-based null model analysis. The results showed a rare significant variation in the composition and alpha diversity of the rhizosphere fungal community among various plant species. Additionally, the soil properties were found to be the primary drivers instead of plant species types. The null model analysis revealed that the rhizosphere fungal communities were primarily driven by stochastic processes (i.e., undominated processes of ecological drift), and the predominance varied with various plant species. Moreover, the assembly processes of rhizosphere fungal communities were significantly related to the changes in soil properties (i.e., soil total carbon, total nitrogen, organic matter, and pH). The co-occurrence network analysis revealed that many keystone species belonged to unclassified fungi. Notably, five network hubs were almost unaffected by the measured soil properties and aboveground plant traits, indicating the effect of stochastic processes on the rhizosphere fungal community assembly. Overall, these results will provide insights into the underlying mechanisms of fungal community assembly in the rhizosphere soils, which are significant for maintaining the functional stability of a developing ecosystem. |
format | Online Article Text |
id | pubmed-9939660 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-99396602023-02-21 Stochastic processes drive the soil fungal communities in a developing mid-channel bar Ye, Fei Hong, Yiguo Yi, Xuemei Sun, Zhaohong Wu, Jiapeng Wang, Yu Front Microbiol Microbiology Intricate associations between rhizosphere microbial communities and plants play a critical role in developing and maintaining of soil ecological functioning. Therefore, understanding the assembly patterns of rhizosphere microbes in different plants and their responses to environmental changes is of great ecological implications for dynamic habitats. In this study, a developing mid-channel bar was employed in the Yangtze River to explore the assembly processes of rhizosphere fungal communities among various plant species using high-throughput sequencing-based null model analysis. The results showed a rare significant variation in the composition and alpha diversity of the rhizosphere fungal community among various plant species. Additionally, the soil properties were found to be the primary drivers instead of plant species types. The null model analysis revealed that the rhizosphere fungal communities were primarily driven by stochastic processes (i.e., undominated processes of ecological drift), and the predominance varied with various plant species. Moreover, the assembly processes of rhizosphere fungal communities were significantly related to the changes in soil properties (i.e., soil total carbon, total nitrogen, organic matter, and pH). The co-occurrence network analysis revealed that many keystone species belonged to unclassified fungi. Notably, five network hubs were almost unaffected by the measured soil properties and aboveground plant traits, indicating the effect of stochastic processes on the rhizosphere fungal community assembly. Overall, these results will provide insights into the underlying mechanisms of fungal community assembly in the rhizosphere soils, which are significant for maintaining the functional stability of a developing ecosystem. Frontiers Media S.A. 2023-02-06 /pmc/articles/PMC9939660/ /pubmed/36814566 http://dx.doi.org/10.3389/fmicb.2023.1104297 Text en Copyright © 2023 Ye, Hong, Yi, Sun, Wu and Wang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Ye, Fei Hong, Yiguo Yi, Xuemei Sun, Zhaohong Wu, Jiapeng Wang, Yu Stochastic processes drive the soil fungal communities in a developing mid-channel bar |
title | Stochastic processes drive the soil fungal communities in a developing mid-channel bar |
title_full | Stochastic processes drive the soil fungal communities in a developing mid-channel bar |
title_fullStr | Stochastic processes drive the soil fungal communities in a developing mid-channel bar |
title_full_unstemmed | Stochastic processes drive the soil fungal communities in a developing mid-channel bar |
title_short | Stochastic processes drive the soil fungal communities in a developing mid-channel bar |
title_sort | stochastic processes drive the soil fungal communities in a developing mid-channel bar |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9939660/ https://www.ncbi.nlm.nih.gov/pubmed/36814566 http://dx.doi.org/10.3389/fmicb.2023.1104297 |
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