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Evaluation of EfficientNet models for COVID-19 detection using lung parenchyma

When the COVID-19 pandemic broke out in the beginning of 2020, it became crucial to enhance early diagnosis with efficient means to reduce dangers and future spread of the viruses as soon as possible. Finding effective treatments and lowering mortality rates is now more important than ever. Scanning...

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Autores principales: Kurt, Zuhal, Işık, Şahin, Kaya, Zeynep, Anagün, Yıldıray, Koca, Nizameddin, Çiçek, Sümeyye
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer London 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9940669/
https://www.ncbi.nlm.nih.gov/pubmed/36843903
http://dx.doi.org/10.1007/s00521-023-08344-z
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author Kurt, Zuhal
Işık, Şahin
Kaya, Zeynep
Anagün, Yıldıray
Koca, Nizameddin
Çiçek, Sümeyye
author_facet Kurt, Zuhal
Işık, Şahin
Kaya, Zeynep
Anagün, Yıldıray
Koca, Nizameddin
Çiçek, Sümeyye
author_sort Kurt, Zuhal
collection PubMed
description When the COVID-19 pandemic broke out in the beginning of 2020, it became crucial to enhance early diagnosis with efficient means to reduce dangers and future spread of the viruses as soon as possible. Finding effective treatments and lowering mortality rates is now more important than ever. Scanning with a computer tomography (CT) scanner is a helpful method for detecting COVID-19 in this regard. The present paper, as such, is an attempt to contribute to this process by generating an open-source, CT-based image dataset. This dataset contains the CT scans of lung parenchyma regions of 180 COVID-19-positive and 86 COVID-19-negative patients taken at the Bursa Yuksek Ihtisas Training and Research Hospital. The experimental studies show that the modified EfficientNet-ap-nish method uses this dataset effectively for diagnostic purposes. Firstly, a smart segmentation mechanism based on the k-means algorithm is applied to this dataset as a preprocessing stage. Then, performance pretrained models are analyzed using different CNN architectures and with our Nish activation function. The statistical rates are obtained by the various EfficientNet models and the highest detection score is obtained with the EfficientNet-B4-ap-nish version, which provides a 97.93% accuracy rate and a 97.33% F1-score. The implications of the proposed method are immense both for present-day applications and future developments.
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spelling pubmed-99406692023-02-21 Evaluation of EfficientNet models for COVID-19 detection using lung parenchyma Kurt, Zuhal Işık, Şahin Kaya, Zeynep Anagün, Yıldıray Koca, Nizameddin Çiçek, Sümeyye Neural Comput Appl Original Article When the COVID-19 pandemic broke out in the beginning of 2020, it became crucial to enhance early diagnosis with efficient means to reduce dangers and future spread of the viruses as soon as possible. Finding effective treatments and lowering mortality rates is now more important than ever. Scanning with a computer tomography (CT) scanner is a helpful method for detecting COVID-19 in this regard. The present paper, as such, is an attempt to contribute to this process by generating an open-source, CT-based image dataset. This dataset contains the CT scans of lung parenchyma regions of 180 COVID-19-positive and 86 COVID-19-negative patients taken at the Bursa Yuksek Ihtisas Training and Research Hospital. The experimental studies show that the modified EfficientNet-ap-nish method uses this dataset effectively for diagnostic purposes. Firstly, a smart segmentation mechanism based on the k-means algorithm is applied to this dataset as a preprocessing stage. Then, performance pretrained models are analyzed using different CNN architectures and with our Nish activation function. The statistical rates are obtained by the various EfficientNet models and the highest detection score is obtained with the EfficientNet-B4-ap-nish version, which provides a 97.93% accuracy rate and a 97.33% F1-score. The implications of the proposed method are immense both for present-day applications and future developments. Springer London 2023-02-20 2023 /pmc/articles/PMC9940669/ /pubmed/36843903 http://dx.doi.org/10.1007/s00521-023-08344-z Text en © The Author(s), under exclusive licence to Springer-Verlag London Ltd., part of Springer Nature 2023, Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Original Article
Kurt, Zuhal
Işık, Şahin
Kaya, Zeynep
Anagün, Yıldıray
Koca, Nizameddin
Çiçek, Sümeyye
Evaluation of EfficientNet models for COVID-19 detection using lung parenchyma
title Evaluation of EfficientNet models for COVID-19 detection using lung parenchyma
title_full Evaluation of EfficientNet models for COVID-19 detection using lung parenchyma
title_fullStr Evaluation of EfficientNet models for COVID-19 detection using lung parenchyma
title_full_unstemmed Evaluation of EfficientNet models for COVID-19 detection using lung parenchyma
title_short Evaluation of EfficientNet models for COVID-19 detection using lung parenchyma
title_sort evaluation of efficientnet models for covid-19 detection using lung parenchyma
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9940669/
https://www.ncbi.nlm.nih.gov/pubmed/36843903
http://dx.doi.org/10.1007/s00521-023-08344-z
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