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Code-free machine learning for classification of central nervous system histopathology images
Machine learning (ML), an application of artificial intelligence, is currently transforming the analysis of biomedical data and specifically of biomedical images including histopathology. The promises of this technology contrast, however, with its currently limited application in routine clinical pr...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9941804/ https://www.ncbi.nlm.nih.gov/pubmed/36734664 http://dx.doi.org/10.1093/jnen/nlac131 |
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author | Jungo, Patric Hewer, Ekkehard |
author_facet | Jungo, Patric Hewer, Ekkehard |
author_sort | Jungo, Patric |
collection | PubMed |
description | Machine learning (ML), an application of artificial intelligence, is currently transforming the analysis of biomedical data and specifically of biomedical images including histopathology. The promises of this technology contrast, however, with its currently limited application in routine clinical practice. This discrepancy is in part due to the extent of informatics expertise typically required for implementation of ML. Therefore, we assessed the suitability of 2 publicly accessible code-free ML platforms (Microsoft Custom Vision and Google AutoML), for classification of histopathological images of diagnostic central nervous system tissue samples. When trained with typically 100 to more than 1000 images, both systems were able to perform nontrivial classifications (glioma vs brain metastasis; astrocytoma vs astrocytosis, prediction of 1p/19q co-deletion in IDH-mutant tumors) based on hematoxylin and eosin-stained images with high accuracy (from ∼80% to nearly 100%). External validation of the predicted accuracy and negative control experiments were found to be crucial for verification of the accuracy predicted by the algorithms. Furthermore, we propose a possible diagnostic workflow for pathologists to implement classification of histopathological images based on code-free machine platforms. |
format | Online Article Text |
id | pubmed-9941804 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-99418042023-02-21 Code-free machine learning for classification of central nervous system histopathology images Jungo, Patric Hewer, Ekkehard J Neuropathol Exp Neurol Original Article Machine learning (ML), an application of artificial intelligence, is currently transforming the analysis of biomedical data and specifically of biomedical images including histopathology. The promises of this technology contrast, however, with its currently limited application in routine clinical practice. This discrepancy is in part due to the extent of informatics expertise typically required for implementation of ML. Therefore, we assessed the suitability of 2 publicly accessible code-free ML platforms (Microsoft Custom Vision and Google AutoML), for classification of histopathological images of diagnostic central nervous system tissue samples. When trained with typically 100 to more than 1000 images, both systems were able to perform nontrivial classifications (glioma vs brain metastasis; astrocytoma vs astrocytosis, prediction of 1p/19q co-deletion in IDH-mutant tumors) based on hematoxylin and eosin-stained images with high accuracy (from ∼80% to nearly 100%). External validation of the predicted accuracy and negative control experiments were found to be crucial for verification of the accuracy predicted by the algorithms. Furthermore, we propose a possible diagnostic workflow for pathologists to implement classification of histopathological images based on code-free machine platforms. Oxford University Press 2023-02-03 /pmc/articles/PMC9941804/ /pubmed/36734664 http://dx.doi.org/10.1093/jnen/nlac131 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of American Association of Neuropathologists, Inc. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Jungo, Patric Hewer, Ekkehard Code-free machine learning for classification of central nervous system histopathology images |
title | Code-free machine learning for classification of central nervous system histopathology images |
title_full | Code-free machine learning for classification of central nervous system histopathology images |
title_fullStr | Code-free machine learning for classification of central nervous system histopathology images |
title_full_unstemmed | Code-free machine learning for classification of central nervous system histopathology images |
title_short | Code-free machine learning for classification of central nervous system histopathology images |
title_sort | code-free machine learning for classification of central nervous system histopathology images |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9941804/ https://www.ncbi.nlm.nih.gov/pubmed/36734664 http://dx.doi.org/10.1093/jnen/nlac131 |
work_keys_str_mv | AT jungopatric codefreemachinelearningforclassificationofcentralnervoussystemhistopathologyimages AT hewerekkehard codefreemachinelearningforclassificationofcentralnervoussystemhistopathologyimages |