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Reversible switching between two common protein folds in a designed system using only temperature
Naturally occurring metamorphic proteins have the ability to interconvert from one folded state to another through either a limited set of mutations or by way of a change in the local environment. Here, we show in a designed system that it is possible to switch reversibly between two of the most com...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
National Academy of Sciences
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9942840/ https://www.ncbi.nlm.nih.gov/pubmed/36669114 http://dx.doi.org/10.1073/pnas.2215418120 |
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author | Solomon, Tsega L. He, Yanan Sari, Nese Chen, Yihong Gallagher, D. Travis Bryan, Philip N. Orban, John |
author_facet | Solomon, Tsega L. He, Yanan Sari, Nese Chen, Yihong Gallagher, D. Travis Bryan, Philip N. Orban, John |
author_sort | Solomon, Tsega L. |
collection | PubMed |
description | Naturally occurring metamorphic proteins have the ability to interconvert from one folded state to another through either a limited set of mutations or by way of a change in the local environment. Here, we show in a designed system that it is possible to switch reversibly between two of the most common monomeric folds employing only temperature changes. We demonstrate that a latent 3α state can be unmasked from an α/β-plait topology with a single V90T amino acid substitution, populating both forms simultaneously. The equilibrium between these two states exhibits temperature dependence, such that the 3α state is predominant (>90%) at 5 °C, while the α/β-plait fold is the major species (>90%) at 30 °C. We describe the structure and dynamics of these topologies, how mutational changes affect the temperature dependence, and the energetics and kinetics of interconversion. Additionally, we demonstrate how ligand-binding function can be tightly regulated by large amplitude changes in protein structure over a relatively narrow temperature range that is relevant to biology. The 3α/αβ switch thus represents a potentially useful approach for designing proteins that alter their fold topologies in response to environmental triggers. It may also serve as a model for computational studies of temperature-dependent protein stability and fold switching. |
format | Online Article Text |
id | pubmed-9942840 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | National Academy of Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-99428402023-07-20 Reversible switching between two common protein folds in a designed system using only temperature Solomon, Tsega L. He, Yanan Sari, Nese Chen, Yihong Gallagher, D. Travis Bryan, Philip N. Orban, John Proc Natl Acad Sci U S A Biological Sciences Naturally occurring metamorphic proteins have the ability to interconvert from one folded state to another through either a limited set of mutations or by way of a change in the local environment. Here, we show in a designed system that it is possible to switch reversibly between two of the most common monomeric folds employing only temperature changes. We demonstrate that a latent 3α state can be unmasked from an α/β-plait topology with a single V90T amino acid substitution, populating both forms simultaneously. The equilibrium between these two states exhibits temperature dependence, such that the 3α state is predominant (>90%) at 5 °C, while the α/β-plait fold is the major species (>90%) at 30 °C. We describe the structure and dynamics of these topologies, how mutational changes affect the temperature dependence, and the energetics and kinetics of interconversion. Additionally, we demonstrate how ligand-binding function can be tightly regulated by large amplitude changes in protein structure over a relatively narrow temperature range that is relevant to biology. The 3α/αβ switch thus represents a potentially useful approach for designing proteins that alter their fold topologies in response to environmental triggers. It may also serve as a model for computational studies of temperature-dependent protein stability and fold switching. National Academy of Sciences 2023-01-20 2023-01-24 /pmc/articles/PMC9942840/ /pubmed/36669114 http://dx.doi.org/10.1073/pnas.2215418120 Text en Copyright © 2023 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/This article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | Biological Sciences Solomon, Tsega L. He, Yanan Sari, Nese Chen, Yihong Gallagher, D. Travis Bryan, Philip N. Orban, John Reversible switching between two common protein folds in a designed system using only temperature |
title | Reversible switching between two common protein folds in a designed system using only temperature |
title_full | Reversible switching between two common protein folds in a designed system using only temperature |
title_fullStr | Reversible switching between two common protein folds in a designed system using only temperature |
title_full_unstemmed | Reversible switching between two common protein folds in a designed system using only temperature |
title_short | Reversible switching between two common protein folds in a designed system using only temperature |
title_sort | reversible switching between two common protein folds in a designed system using only temperature |
topic | Biological Sciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9942840/ https://www.ncbi.nlm.nih.gov/pubmed/36669114 http://dx.doi.org/10.1073/pnas.2215418120 |
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