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Predicting transient ischemic attack risk in patients with mild carotid stenosis using machine learning and CT radiomics
OBJECTIVE: This study aims to establish a radiomics-based machine learning model that predicts the risk of transient ischemic attack in patients with mild carotid stenosis (30–50% North American Symptomatic Carotid Endarterectomy Trial) using extracted computed tomography radiomics features and clin...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9944715/ https://www.ncbi.nlm.nih.gov/pubmed/36846119 http://dx.doi.org/10.3389/fneur.2023.1105616 |
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author | Xia, Hai Yuan, Lei Zhao, Wei Zhang, Chenglei Zhao, Lingfeng Hou, Jialin Luan, Yancheng Bi, Yuxin Feng, Yaoyu |
author_facet | Xia, Hai Yuan, Lei Zhao, Wei Zhang, Chenglei Zhao, Lingfeng Hou, Jialin Luan, Yancheng Bi, Yuxin Feng, Yaoyu |
author_sort | Xia, Hai |
collection | PubMed |
description | OBJECTIVE: This study aims to establish a radiomics-based machine learning model that predicts the risk of transient ischemic attack in patients with mild carotid stenosis (30–50% North American Symptomatic Carotid Endarterectomy Trial) using extracted computed tomography radiomics features and clinical information. METHODS: A total of 179 patients underwent carotid computed tomography angiography (CTA), and 219 carotid arteries with a plaque at the carotid bifurcation or proximal to the internal carotid artery were selected. The patients were divided into two groups; patients with symptoms of transient ischemic attack after CTA and patients without symptoms of transient ischemic attack after CTA. Then we performed random sampling methods stratified by the predictive outcome to obtain the training set (N = 165) and testing set (N = 66). 3D Slicer was employed to select the site of plaque on the computed tomography image as the volume of interest. An open-source package PyRadiomics in Python was used to extract radiomics features from the volume of interests. The random forest and logistic regression models were used to screen feature variables, and five classification algorithms were used, including random forest, eXtreme Gradient Boosting, logistic regression, support vector machine, and k-nearest neighbors. Data on radiomic feature information, clinical information, and the combination of these pieces of information were used to generate the model that predicts the risk of transient ischemic attack in patients with mild carotid artery stenosis (30–50% North American Symptomatic Carotid Endarterectomy Trial). RESULTS: The random forest model that was built based on the radiomics and clinical feature information had the highest accuracy (area under curve = 0.879; 95% confidence interval, 0.787–0.979). The combined model outperformed the clinical model, whereas the combined model showed no significant difference from the radiomics model. CONCLUSION: The random forest model constructed with both radiomics and clinical information can accurately predict and improve discriminative power of computed tomography angiography in identifying ischemic symptoms in patients with carotid atherosclerosis. This model can aid in guiding the follow-up treatment of patients at high risk. |
format | Online Article Text |
id | pubmed-9944715 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-99447152023-02-23 Predicting transient ischemic attack risk in patients with mild carotid stenosis using machine learning and CT radiomics Xia, Hai Yuan, Lei Zhao, Wei Zhang, Chenglei Zhao, Lingfeng Hou, Jialin Luan, Yancheng Bi, Yuxin Feng, Yaoyu Front Neurol Neurology OBJECTIVE: This study aims to establish a radiomics-based machine learning model that predicts the risk of transient ischemic attack in patients with mild carotid stenosis (30–50% North American Symptomatic Carotid Endarterectomy Trial) using extracted computed tomography radiomics features and clinical information. METHODS: A total of 179 patients underwent carotid computed tomography angiography (CTA), and 219 carotid arteries with a plaque at the carotid bifurcation or proximal to the internal carotid artery were selected. The patients were divided into two groups; patients with symptoms of transient ischemic attack after CTA and patients without symptoms of transient ischemic attack after CTA. Then we performed random sampling methods stratified by the predictive outcome to obtain the training set (N = 165) and testing set (N = 66). 3D Slicer was employed to select the site of plaque on the computed tomography image as the volume of interest. An open-source package PyRadiomics in Python was used to extract radiomics features from the volume of interests. The random forest and logistic regression models were used to screen feature variables, and five classification algorithms were used, including random forest, eXtreme Gradient Boosting, logistic regression, support vector machine, and k-nearest neighbors. Data on radiomic feature information, clinical information, and the combination of these pieces of information were used to generate the model that predicts the risk of transient ischemic attack in patients with mild carotid artery stenosis (30–50% North American Symptomatic Carotid Endarterectomy Trial). RESULTS: The random forest model that was built based on the radiomics and clinical feature information had the highest accuracy (area under curve = 0.879; 95% confidence interval, 0.787–0.979). The combined model outperformed the clinical model, whereas the combined model showed no significant difference from the radiomics model. CONCLUSION: The random forest model constructed with both radiomics and clinical information can accurately predict and improve discriminative power of computed tomography angiography in identifying ischemic symptoms in patients with carotid atherosclerosis. This model can aid in guiding the follow-up treatment of patients at high risk. Frontiers Media S.A. 2023-02-08 /pmc/articles/PMC9944715/ /pubmed/36846119 http://dx.doi.org/10.3389/fneur.2023.1105616 Text en Copyright © 2023 Xia, Yuan, Zhao, Zhang, Zhao, Hou, Luan, Bi and Feng. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neurology Xia, Hai Yuan, Lei Zhao, Wei Zhang, Chenglei Zhao, Lingfeng Hou, Jialin Luan, Yancheng Bi, Yuxin Feng, Yaoyu Predicting transient ischemic attack risk in patients with mild carotid stenosis using machine learning and CT radiomics |
title | Predicting transient ischemic attack risk in patients with mild carotid stenosis using machine learning and CT radiomics |
title_full | Predicting transient ischemic attack risk in patients with mild carotid stenosis using machine learning and CT radiomics |
title_fullStr | Predicting transient ischemic attack risk in patients with mild carotid stenosis using machine learning and CT radiomics |
title_full_unstemmed | Predicting transient ischemic attack risk in patients with mild carotid stenosis using machine learning and CT radiomics |
title_short | Predicting transient ischemic attack risk in patients with mild carotid stenosis using machine learning and CT radiomics |
title_sort | predicting transient ischemic attack risk in patients with mild carotid stenosis using machine learning and ct radiomics |
topic | Neurology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9944715/ https://www.ncbi.nlm.nih.gov/pubmed/36846119 http://dx.doi.org/10.3389/fneur.2023.1105616 |
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