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Datasets for training and validating a deep learning-based system to detect microfossil fish teeth from slide images
In this paper, we describe the three datasets that were used to train, validate, and test deep learning models to detect microfossil fish teeth. The first dataset was created for training and validating a Mask R-CNN model to detect fish teeth in the images taken using the microscope. The training se...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9945703/ https://www.ncbi.nlm.nih.gov/pubmed/36845646 http://dx.doi.org/10.1016/j.dib.2023.108940 |
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author | Mimura, Kazuhide Nakamura, Kentaro |
author_facet | Mimura, Kazuhide Nakamura, Kentaro |
author_sort | Mimura, Kazuhide |
collection | PubMed |
description | In this paper, we describe the three datasets that were used to train, validate, and test deep learning models to detect microfossil fish teeth. The first dataset was created for training and validating a Mask R-CNN model to detect fish teeth in the images taken using the microscope. The training set contained 866 images and one annotation file; the validation set contained 92 images and one annotation file. The second dataset was created for training and validating EfficientNet-V2 models; it included 17,400 images of teeth and 15,036 images that contained only noise (particles other than teeth). The third dataset was created to evaluate the performance of a system that combines a Mask R-CNN model and an EfficientNet-V2 model; it contained 5177 images with annotation files for the locations of 431 teeth within the images. |
format | Online Article Text |
id | pubmed-9945703 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-99457032023-02-23 Datasets for training and validating a deep learning-based system to detect microfossil fish teeth from slide images Mimura, Kazuhide Nakamura, Kentaro Data Brief Data Article In this paper, we describe the three datasets that were used to train, validate, and test deep learning models to detect microfossil fish teeth. The first dataset was created for training and validating a Mask R-CNN model to detect fish teeth in the images taken using the microscope. The training set contained 866 images and one annotation file; the validation set contained 92 images and one annotation file. The second dataset was created for training and validating EfficientNet-V2 models; it included 17,400 images of teeth and 15,036 images that contained only noise (particles other than teeth). The third dataset was created to evaluate the performance of a system that combines a Mask R-CNN model and an EfficientNet-V2 model; it contained 5177 images with annotation files for the locations of 431 teeth within the images. Elsevier 2023-01-31 /pmc/articles/PMC9945703/ /pubmed/36845646 http://dx.doi.org/10.1016/j.dib.2023.108940 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Mimura, Kazuhide Nakamura, Kentaro Datasets for training and validating a deep learning-based system to detect microfossil fish teeth from slide images |
title | Datasets for training and validating a deep learning-based system to detect microfossil fish teeth from slide images |
title_full | Datasets for training and validating a deep learning-based system to detect microfossil fish teeth from slide images |
title_fullStr | Datasets for training and validating a deep learning-based system to detect microfossil fish teeth from slide images |
title_full_unstemmed | Datasets for training and validating a deep learning-based system to detect microfossil fish teeth from slide images |
title_short | Datasets for training and validating a deep learning-based system to detect microfossil fish teeth from slide images |
title_sort | datasets for training and validating a deep learning-based system to detect microfossil fish teeth from slide images |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9945703/ https://www.ncbi.nlm.nih.gov/pubmed/36845646 http://dx.doi.org/10.1016/j.dib.2023.108940 |
work_keys_str_mv | AT mimurakazuhide datasetsfortrainingandvalidatingadeeplearningbasedsystemtodetectmicrofossilfishteethfromslideimages AT nakamurakentaro datasetsfortrainingandvalidatingadeeplearningbasedsystemtodetectmicrofossilfishteethfromslideimages |