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Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis

In the present study, the nearly complete mitochondrial genome of Euphaea ochracea was described and its phylogenetic position in the family Euphaeidae was analyzed. Here, we recovered 13 protein-coding genes, 22 transfer RNAs, 2 ribosomal RNAs and a partial control region, resulting in a mitogenome...

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Autores principales: Miga, Marylin, Jahari, Puteri Nur Syahzanani, Parimannan, Sivachandran, Rajandas, Heera, Latiff, Muhammad Abu Bakar, Jing Wei, Yap, Shamsir, Mohd Shahir, Mohd Salleh, Faezah
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9946316/
https://www.ncbi.nlm.nih.gov/pubmed/36845007
http://dx.doi.org/10.1080/23802359.2023.2179355
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author Miga, Marylin
Jahari, Puteri Nur Syahzanani
Parimannan, Sivachandran
Rajandas, Heera
Latiff, Muhammad Abu Bakar
Jing Wei, Yap
Shamsir, Mohd Shahir
Mohd Salleh, Faezah
author_facet Miga, Marylin
Jahari, Puteri Nur Syahzanani
Parimannan, Sivachandran
Rajandas, Heera
Latiff, Muhammad Abu Bakar
Jing Wei, Yap
Shamsir, Mohd Shahir
Mohd Salleh, Faezah
author_sort Miga, Marylin
collection PubMed
description In the present study, the nearly complete mitochondrial genome of Euphaea ochracea was described and its phylogenetic position in the family Euphaeidae was analyzed. Here, we recovered 13 protein-coding genes, 22 transfer RNAs, 2 ribosomal RNAs and a partial control region, resulting in a mitogenome length of 15,545bp. All protein-coding genes were initiated by the typical ATN codon except nad3 and nad1, which utilizes the TTG codon. Four protein-coding genes (cox1, cox2, cox3 and nad5) are terminated by an incomplete stop codon T, while others end with either a TAA or TAG codon. The intergenic spacer region, S5, is absent in this mitogenome, supporting the lack of this region as a specific character in damselflies. Phylogenetic analysis showed that the newly sequenced E. ochracea is phylogenetically closer to E. ornata with a high support value.
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spelling pubmed-99463162023-02-23 Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis Miga, Marylin Jahari, Puteri Nur Syahzanani Parimannan, Sivachandran Rajandas, Heera Latiff, Muhammad Abu Bakar Jing Wei, Yap Shamsir, Mohd Shahir Mohd Salleh, Faezah Mitochondrial DNA B Resour MitoGenome Announcement In the present study, the nearly complete mitochondrial genome of Euphaea ochracea was described and its phylogenetic position in the family Euphaeidae was analyzed. Here, we recovered 13 protein-coding genes, 22 transfer RNAs, 2 ribosomal RNAs and a partial control region, resulting in a mitogenome length of 15,545bp. All protein-coding genes were initiated by the typical ATN codon except nad3 and nad1, which utilizes the TTG codon. Four protein-coding genes (cox1, cox2, cox3 and nad5) are terminated by an incomplete stop codon T, while others end with either a TAA or TAG codon. The intergenic spacer region, S5, is absent in this mitogenome, supporting the lack of this region as a specific character in damselflies. Phylogenetic analysis showed that the newly sequenced E. ochracea is phylogenetically closer to E. ornata with a high support value. Taylor & Francis 2023-02-20 /pmc/articles/PMC9946316/ /pubmed/36845007 http://dx.doi.org/10.1080/23802359.2023.2179355 Text en © 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle MitoGenome Announcement
Miga, Marylin
Jahari, Puteri Nur Syahzanani
Parimannan, Sivachandran
Rajandas, Heera
Latiff, Muhammad Abu Bakar
Jing Wei, Yap
Shamsir, Mohd Shahir
Mohd Salleh, Faezah
Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis
title Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis
title_full Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis
title_fullStr Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis
title_full_unstemmed Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis
title_short Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis
title_sort characterization of the nearly complete mitochondrial genome of ochraceous darkies, euphaea ochracea selys, 1859 (odonata: zygoptera: euphaeidae) and phylogenetic analysis
topic MitoGenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9946316/
https://www.ncbi.nlm.nih.gov/pubmed/36845007
http://dx.doi.org/10.1080/23802359.2023.2179355
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