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Integrated single-cell multiomics reveals novel immune candidate markers for post-traumatic coagulopathy

INTRODUCTION: Post-traumatic coagulopathy (PTC) is a critical pathology in traumatic brain injury (TBI), however, its potential mechanism is not clear. To explore this in peripheral samples, we integrated single cell RNA-sequencing and T cell repertoire (TCR)-sequencing across a cohort of patients w...

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Detalles Bibliográficos
Autores principales: Zheng, Ping, Zhang, Ning, Ren, Dabin, Yu, Cong, Zhao, Bin, Bai, Qingke, Zhang, Yisong, Sun, Wanju
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9946684/
https://www.ncbi.nlm.nih.gov/pubmed/36846021
http://dx.doi.org/10.3389/fimmu.2022.1095657
Descripción
Sumario:INTRODUCTION: Post-traumatic coagulopathy (PTC) is a critical pathology in traumatic brain injury (TBI), however, its potential mechanism is not clear. To explore this in peripheral samples, we integrated single cell RNA-sequencing and T cell repertoire (TCR)-sequencing across a cohort of patients with TBI. METHODS: Clinical samples from patients with more brain severity demonstrated overexpression of T cell receptor–encoding genes and less TCR diversity. RESULTS: By mapping TCR clonality, we found patients with PTC have less TCR clones, and the TCR clones are mainly distributed in cytotoxic effector CD8+T cell. In addition, the counts of CD8+ T cell and natural killer (NK) cells are associated with the coagulation parameter by WGCNA, and the granzyme and lectin-like receptor profiles are also decreased in the peripheral blood from TBI patients, suggesting that reduced peripheral CD8+ clonality and cytotoxic profiles may be involved in PTC after TBI. CONCLUSION: Our work systematically revealed the critical immune status in PTC patients at the single-cell level.