Cargando…

Application of proteomics to determine the mechanism of ozone on sweet cherries (Prunus avium L.) by time-series analysis

This research investigated the mechanism of ozone treatment on sweet cherry (Prunus avium L.) by Lable-free quantification proteomics and physiological traits. The results showed that 4557 master proteins were identified in all the samples, and 3149 proteins were common to all groups. Mfuzz analyses...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhao, Yuehan, Hou, Zhaohua, Zhang, Na, Ji, Haipeng, Dong, Chenghu, Yu, Jinze, Chen, Xueling, Chen, Cunkun, Guo, Honglian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9948404/
https://www.ncbi.nlm.nih.gov/pubmed/36844069
http://dx.doi.org/10.3389/fpls.2023.1065465
_version_ 1784892773974933504
author Zhao, Yuehan
Hou, Zhaohua
Zhang, Na
Ji, Haipeng
Dong, Chenghu
Yu, Jinze
Chen, Xueling
Chen, Cunkun
Guo, Honglian
author_facet Zhao, Yuehan
Hou, Zhaohua
Zhang, Na
Ji, Haipeng
Dong, Chenghu
Yu, Jinze
Chen, Xueling
Chen, Cunkun
Guo, Honglian
author_sort Zhao, Yuehan
collection PubMed
description This research investigated the mechanism of ozone treatment on sweet cherry (Prunus avium L.) by Lable-free quantification proteomics and physiological traits. The results showed that 4557 master proteins were identified in all the samples, and 3149 proteins were common to all groups. Mfuzz analyses revealed 3149 candidate proteins. KEGG annotation and enrichment analysis showed proteins related to carbohydrate and energy metabolism, protein, amino acids, and nucleotide sugar biosynthesis and degradation, and fruit parameters were characterized and quantified. The conclusions were supported by the fact that the qRT-PCR results agreed with the proteomics results. For the first time, this study reveals the mechanism of cherry in response to ozone treatment at a proteome level.
format Online
Article
Text
id pubmed-9948404
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-99484042023-02-24 Application of proteomics to determine the mechanism of ozone on sweet cherries (Prunus avium L.) by time-series analysis Zhao, Yuehan Hou, Zhaohua Zhang, Na Ji, Haipeng Dong, Chenghu Yu, Jinze Chen, Xueling Chen, Cunkun Guo, Honglian Front Plant Sci Plant Science This research investigated the mechanism of ozone treatment on sweet cherry (Prunus avium L.) by Lable-free quantification proteomics and physiological traits. The results showed that 4557 master proteins were identified in all the samples, and 3149 proteins were common to all groups. Mfuzz analyses revealed 3149 candidate proteins. KEGG annotation and enrichment analysis showed proteins related to carbohydrate and energy metabolism, protein, amino acids, and nucleotide sugar biosynthesis and degradation, and fruit parameters were characterized and quantified. The conclusions were supported by the fact that the qRT-PCR results agreed with the proteomics results. For the first time, this study reveals the mechanism of cherry in response to ozone treatment at a proteome level. Frontiers Media S.A. 2023-02-09 /pmc/articles/PMC9948404/ /pubmed/36844069 http://dx.doi.org/10.3389/fpls.2023.1065465 Text en Copyright © 2023 Zhao, Hou, Zhang, Ji, Dong, Yu, Chen, Chen and Guo https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Zhao, Yuehan
Hou, Zhaohua
Zhang, Na
Ji, Haipeng
Dong, Chenghu
Yu, Jinze
Chen, Xueling
Chen, Cunkun
Guo, Honglian
Application of proteomics to determine the mechanism of ozone on sweet cherries (Prunus avium L.) by time-series analysis
title Application of proteomics to determine the mechanism of ozone on sweet cherries (Prunus avium L.) by time-series analysis
title_full Application of proteomics to determine the mechanism of ozone on sweet cherries (Prunus avium L.) by time-series analysis
title_fullStr Application of proteomics to determine the mechanism of ozone on sweet cherries (Prunus avium L.) by time-series analysis
title_full_unstemmed Application of proteomics to determine the mechanism of ozone on sweet cherries (Prunus avium L.) by time-series analysis
title_short Application of proteomics to determine the mechanism of ozone on sweet cherries (Prunus avium L.) by time-series analysis
title_sort application of proteomics to determine the mechanism of ozone on sweet cherries (prunus avium l.) by time-series analysis
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9948404/
https://www.ncbi.nlm.nih.gov/pubmed/36844069
http://dx.doi.org/10.3389/fpls.2023.1065465
work_keys_str_mv AT zhaoyuehan applicationofproteomicstodeterminethemechanismofozoneonsweetcherriesprunusaviumlbytimeseriesanalysis
AT houzhaohua applicationofproteomicstodeterminethemechanismofozoneonsweetcherriesprunusaviumlbytimeseriesanalysis
AT zhangna applicationofproteomicstodeterminethemechanismofozoneonsweetcherriesprunusaviumlbytimeseriesanalysis
AT jihaipeng applicationofproteomicstodeterminethemechanismofozoneonsweetcherriesprunusaviumlbytimeseriesanalysis
AT dongchenghu applicationofproteomicstodeterminethemechanismofozoneonsweetcherriesprunusaviumlbytimeseriesanalysis
AT yujinze applicationofproteomicstodeterminethemechanismofozoneonsweetcherriesprunusaviumlbytimeseriesanalysis
AT chenxueling applicationofproteomicstodeterminethemechanismofozoneonsweetcherriesprunusaviumlbytimeseriesanalysis
AT chencunkun applicationofproteomicstodeterminethemechanismofozoneonsweetcherriesprunusaviumlbytimeseriesanalysis
AT guohonglian applicationofproteomicstodeterminethemechanismofozoneonsweetcherriesprunusaviumlbytimeseriesanalysis