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High-fidelity Database-free Deep Learning Reconstruction for Real-time Cine Cardiac MRI

Real-time cine cardiac MRI provides an ECG-free free-breathing alternative to clinical gold-standard ECG-gated breath-hold segmented cine MRI for evaluation of heart function. Real-time cine MRI data acquisition during free breathing snapshot imaging enables imaging of patient cohorts that cannot be...

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Autores principales: Demirel, Ömer Burak, Zhang, Chi, Yaman, Burhaneddin, Gulle, Merve, Shenoy, Chetan, Leiner, Tim, Kellman, Peter, Akçakaya, Mehmet
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9948950/
https://www.ncbi.nlm.nih.gov/pubmed/36824797
http://dx.doi.org/10.1101/2023.02.13.528388
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author Demirel, Ömer Burak
Zhang, Chi
Yaman, Burhaneddin
Gulle, Merve
Shenoy, Chetan
Leiner, Tim
Kellman, Peter
Akçakaya, Mehmet
author_facet Demirel, Ömer Burak
Zhang, Chi
Yaman, Burhaneddin
Gulle, Merve
Shenoy, Chetan
Leiner, Tim
Kellman, Peter
Akçakaya, Mehmet
author_sort Demirel, Ömer Burak
collection PubMed
description Real-time cine cardiac MRI provides an ECG-free free-breathing alternative to clinical gold-standard ECG-gated breath-hold segmented cine MRI for evaluation of heart function. Real-time cine MRI data acquisition during free breathing snapshot imaging enables imaging of patient cohorts that cannot be imaged with segmented or breath-hold acquisitions, but requires rapid imaging to achieve sufficient spatial-temporal resolutions. However, at high acceleration rates, conventional reconstruction techniques suffer from residual aliasing and temporal blurring, including advanced methods such as compressed sensing with radial trajectories. Recently, deep learning (DL) reconstruction has emerged as a powerful tool in MRI. However, its utility for free-breathing real-time cine MRI has been limited, as database-learning of spatio-temporal correlations with varying breathing and cardiac motion patterns across subjects has been challenging. Zero-shot self-supervised physics-guided deep learning (PG-DL) reconstruction has been proposed to overcome such challenges of database training by enabling subject-specific training. In this work, we adapt zero-shot PG-DL for real-time cine MRI with a spatio-temporal regularization. We compare our method to TGRAPPA, locally low-rank (LLR) regularized reconstruction and database-trained PG-DL reconstruction, both for retrospectively and prospectively accelerated datasets. Results on highly accelerated real-time Cartesian cine MRI show that the proposed method outperforms other reconstruction methods, both visibly in terms of noise and aliasing, and quantitatively.
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spelling pubmed-99489502023-02-24 High-fidelity Database-free Deep Learning Reconstruction for Real-time Cine Cardiac MRI Demirel, Ömer Burak Zhang, Chi Yaman, Burhaneddin Gulle, Merve Shenoy, Chetan Leiner, Tim Kellman, Peter Akçakaya, Mehmet bioRxiv Article Real-time cine cardiac MRI provides an ECG-free free-breathing alternative to clinical gold-standard ECG-gated breath-hold segmented cine MRI for evaluation of heart function. Real-time cine MRI data acquisition during free breathing snapshot imaging enables imaging of patient cohorts that cannot be imaged with segmented or breath-hold acquisitions, but requires rapid imaging to achieve sufficient spatial-temporal resolutions. However, at high acceleration rates, conventional reconstruction techniques suffer from residual aliasing and temporal blurring, including advanced methods such as compressed sensing with radial trajectories. Recently, deep learning (DL) reconstruction has emerged as a powerful tool in MRI. However, its utility for free-breathing real-time cine MRI has been limited, as database-learning of spatio-temporal correlations with varying breathing and cardiac motion patterns across subjects has been challenging. Zero-shot self-supervised physics-guided deep learning (PG-DL) reconstruction has been proposed to overcome such challenges of database training by enabling subject-specific training. In this work, we adapt zero-shot PG-DL for real-time cine MRI with a spatio-temporal regularization. We compare our method to TGRAPPA, locally low-rank (LLR) regularized reconstruction and database-trained PG-DL reconstruction, both for retrospectively and prospectively accelerated datasets. Results on highly accelerated real-time Cartesian cine MRI show that the proposed method outperforms other reconstruction methods, both visibly in terms of noise and aliasing, and quantitatively. Cold Spring Harbor Laboratory 2023-02-15 /pmc/articles/PMC9948950/ /pubmed/36824797 http://dx.doi.org/10.1101/2023.02.13.528388 Text en https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, for noncommercial purposes only, and only so long as attribution is given to the creator.
spellingShingle Article
Demirel, Ömer Burak
Zhang, Chi
Yaman, Burhaneddin
Gulle, Merve
Shenoy, Chetan
Leiner, Tim
Kellman, Peter
Akçakaya, Mehmet
High-fidelity Database-free Deep Learning Reconstruction for Real-time Cine Cardiac MRI
title High-fidelity Database-free Deep Learning Reconstruction for Real-time Cine Cardiac MRI
title_full High-fidelity Database-free Deep Learning Reconstruction for Real-time Cine Cardiac MRI
title_fullStr High-fidelity Database-free Deep Learning Reconstruction for Real-time Cine Cardiac MRI
title_full_unstemmed High-fidelity Database-free Deep Learning Reconstruction for Real-time Cine Cardiac MRI
title_short High-fidelity Database-free Deep Learning Reconstruction for Real-time Cine Cardiac MRI
title_sort high-fidelity database-free deep learning reconstruction for real-time cine cardiac mri
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9948950/
https://www.ncbi.nlm.nih.gov/pubmed/36824797
http://dx.doi.org/10.1101/2023.02.13.528388
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