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Infrastructure for bioinformatics applications in Tanzania: Lessons from the Sickle Cell Programme

Sickle cell disease (SCD) is a common genetic disorder in Africa. Some ongoing work in SCD research includes the analysis and comparisons of variation in phenotypic presentations and disease outcomes with the genotypic signatures. This has contributed to the observed growth of molecular and genetic...

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Autores principales: Mwita, Liberata A., Mawalla, William F., Mtiiye, Frank R., Kandonga, Daniel, Kent, Jill, Makani, Julie, Sangeda, Raphael Z.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9949651/
https://www.ncbi.nlm.nih.gov/pubmed/36821534
http://dx.doi.org/10.1371/journal.pcbi.1010848
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author Mwita, Liberata A.
Mawalla, William F.
Mtiiye, Frank R.
Kandonga, Daniel
Kent, Jill
Makani, Julie
Sangeda, Raphael Z.
author_facet Mwita, Liberata A.
Mawalla, William F.
Mtiiye, Frank R.
Kandonga, Daniel
Kent, Jill
Makani, Julie
Sangeda, Raphael Z.
author_sort Mwita, Liberata A.
collection PubMed
description Sickle cell disease (SCD) is a common genetic disorder in Africa. Some ongoing work in SCD research includes the analysis and comparisons of variation in phenotypic presentations and disease outcomes with the genotypic signatures. This has contributed to the observed growth of molecular and genetic data in SCD. However, while the “omics” data continues to pile, the capacity to interpret and turn the genetic findings into clinical practice is still underdeveloped, especially in the developing region. Building bioinformatics infrastructure and capacity in the region is key to bridging the gap. This paper seeks to illustrate how the Sickle Cell Programme (SCP) at the Muhimbili University of Health and Allied Sciences (MUHAS) in Tanzania, modeled the integration of infrastructure for bioinformatics and clinical research while running day-to-day clinical care for SCD in Tanzania.
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spelling pubmed-99496512023-02-24 Infrastructure for bioinformatics applications in Tanzania: Lessons from the Sickle Cell Programme Mwita, Liberata A. Mawalla, William F. Mtiiye, Frank R. Kandonga, Daniel Kent, Jill Makani, Julie Sangeda, Raphael Z. PLoS Comput Biol Perspective Sickle cell disease (SCD) is a common genetic disorder in Africa. Some ongoing work in SCD research includes the analysis and comparisons of variation in phenotypic presentations and disease outcomes with the genotypic signatures. This has contributed to the observed growth of molecular and genetic data in SCD. However, while the “omics” data continues to pile, the capacity to interpret and turn the genetic findings into clinical practice is still underdeveloped, especially in the developing region. Building bioinformatics infrastructure and capacity in the region is key to bridging the gap. This paper seeks to illustrate how the Sickle Cell Programme (SCP) at the Muhimbili University of Health and Allied Sciences (MUHAS) in Tanzania, modeled the integration of infrastructure for bioinformatics and clinical research while running day-to-day clinical care for SCD in Tanzania. Public Library of Science 2023-02-23 /pmc/articles/PMC9949651/ /pubmed/36821534 http://dx.doi.org/10.1371/journal.pcbi.1010848 Text en © 2023 Mwita et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Perspective
Mwita, Liberata A.
Mawalla, William F.
Mtiiye, Frank R.
Kandonga, Daniel
Kent, Jill
Makani, Julie
Sangeda, Raphael Z.
Infrastructure for bioinformatics applications in Tanzania: Lessons from the Sickle Cell Programme
title Infrastructure for bioinformatics applications in Tanzania: Lessons from the Sickle Cell Programme
title_full Infrastructure for bioinformatics applications in Tanzania: Lessons from the Sickle Cell Programme
title_fullStr Infrastructure for bioinformatics applications in Tanzania: Lessons from the Sickle Cell Programme
title_full_unstemmed Infrastructure for bioinformatics applications in Tanzania: Lessons from the Sickle Cell Programme
title_short Infrastructure for bioinformatics applications in Tanzania: Lessons from the Sickle Cell Programme
title_sort infrastructure for bioinformatics applications in tanzania: lessons from the sickle cell programme
topic Perspective
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9949651/
https://www.ncbi.nlm.nih.gov/pubmed/36821534
http://dx.doi.org/10.1371/journal.pcbi.1010848
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