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A novel ferroptosis-related gene signature for predicting prognosis in multiple myeloma
BACKGROUND: Multiple myeloma (MM) is a highly malignant hematological tumor with a poor overall survival (OS). Due to the high heterogeneity of MM, it is necessary to explore novel markers for the prognosis prediction for MM patients. Ferroptosis is a form of regulated cell death, playing a critical...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9950937/ https://www.ncbi.nlm.nih.gov/pubmed/36845727 http://dx.doi.org/10.3389/fonc.2023.999688 |
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author | Gao, Dandan Liu, Rui Lv, Yang Feng, Yuandong Hong, Fei Xu, Xuezhu Hu, Jinsong He, Aili Yang, Yun |
author_facet | Gao, Dandan Liu, Rui Lv, Yang Feng, Yuandong Hong, Fei Xu, Xuezhu Hu, Jinsong He, Aili Yang, Yun |
author_sort | Gao, Dandan |
collection | PubMed |
description | BACKGROUND: Multiple myeloma (MM) is a highly malignant hematological tumor with a poor overall survival (OS). Due to the high heterogeneity of MM, it is necessary to explore novel markers for the prognosis prediction for MM patients. Ferroptosis is a form of regulated cell death, playing a critical role in tumorigenesis and cancer progression. However, the predictive role of ferroptosis-related genes (FRGs) in MM prognosis remains unknown. METHODS: This study collected 107 FRGs previously reported and utilized the least absolute shrinkage and selection operator (LASSO) cox regression model to construct a multi-genes risk signature model upon FRGs. The ESTIMATE algorithm and immune-related single-sample gene set enrichment analysis (ssGSEA) were carried out to evaluate immune infiltration level. Drug sensitivity was assessed based on the Genomics of Drug Sensitivity in Cancer database (GDSC). Then the synergy effect was determined with Cell counting kit-8 (CCK-8) assay and SynergyFinder software. RESULTS: A 6-gene prognostic risk signature model was constructed, and MM patients were divided into high and low risk groups. Kaplan-Meier survival curves showed that patients in the high risk group had significantly reduced OS compared with patients in the low risk group. Besides, the risk score was an independent predictor for OS. Receiver operating characteristic (ROC) curve analysis confirmed the predictive capacity of the risk signature. Combination of risk score and ISS stage had better prediction performance. Enrichment analysis revealed immune response, MYC, mTOR, proteasome and oxidative phosphorylation were enriched in high risk MM patients. We found high risk MM patients had lower immune scores and immune infiltration levels. Moreover, further analysis found that MM patients in high risk group were sensitive to bortezomib and lenalidomide. At last, the results of the in vitro experiment showed that ferroptosis inducers (RSL3 and ML162) may synergistically enhance the cytotoxicity of bortezomib and lenalidomide against MM cell line RPMI-8226. CONCLUSION: This study provides novel insights into roles of ferroptosis in MM prognosis prediction, immune levels and drug sensitivity, which complements and improves current grading systems. |
format | Online Article Text |
id | pubmed-9950937 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-99509372023-02-25 A novel ferroptosis-related gene signature for predicting prognosis in multiple myeloma Gao, Dandan Liu, Rui Lv, Yang Feng, Yuandong Hong, Fei Xu, Xuezhu Hu, Jinsong He, Aili Yang, Yun Front Oncol Oncology BACKGROUND: Multiple myeloma (MM) is a highly malignant hematological tumor with a poor overall survival (OS). Due to the high heterogeneity of MM, it is necessary to explore novel markers for the prognosis prediction for MM patients. Ferroptosis is a form of regulated cell death, playing a critical role in tumorigenesis and cancer progression. However, the predictive role of ferroptosis-related genes (FRGs) in MM prognosis remains unknown. METHODS: This study collected 107 FRGs previously reported and utilized the least absolute shrinkage and selection operator (LASSO) cox regression model to construct a multi-genes risk signature model upon FRGs. The ESTIMATE algorithm and immune-related single-sample gene set enrichment analysis (ssGSEA) were carried out to evaluate immune infiltration level. Drug sensitivity was assessed based on the Genomics of Drug Sensitivity in Cancer database (GDSC). Then the synergy effect was determined with Cell counting kit-8 (CCK-8) assay and SynergyFinder software. RESULTS: A 6-gene prognostic risk signature model was constructed, and MM patients were divided into high and low risk groups. Kaplan-Meier survival curves showed that patients in the high risk group had significantly reduced OS compared with patients in the low risk group. Besides, the risk score was an independent predictor for OS. Receiver operating characteristic (ROC) curve analysis confirmed the predictive capacity of the risk signature. Combination of risk score and ISS stage had better prediction performance. Enrichment analysis revealed immune response, MYC, mTOR, proteasome and oxidative phosphorylation were enriched in high risk MM patients. We found high risk MM patients had lower immune scores and immune infiltration levels. Moreover, further analysis found that MM patients in high risk group were sensitive to bortezomib and lenalidomide. At last, the results of the in vitro experiment showed that ferroptosis inducers (RSL3 and ML162) may synergistically enhance the cytotoxicity of bortezomib and lenalidomide against MM cell line RPMI-8226. CONCLUSION: This study provides novel insights into roles of ferroptosis in MM prognosis prediction, immune levels and drug sensitivity, which complements and improves current grading systems. Frontiers Media S.A. 2023-02-10 /pmc/articles/PMC9950937/ /pubmed/36845727 http://dx.doi.org/10.3389/fonc.2023.999688 Text en Copyright © 2023 Gao, Liu, Lv, Feng, Hong, Xu, Hu, He and Yang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Gao, Dandan Liu, Rui Lv, Yang Feng, Yuandong Hong, Fei Xu, Xuezhu Hu, Jinsong He, Aili Yang, Yun A novel ferroptosis-related gene signature for predicting prognosis in multiple myeloma |
title | A novel ferroptosis-related gene signature for predicting prognosis in multiple myeloma |
title_full | A novel ferroptosis-related gene signature for predicting prognosis in multiple myeloma |
title_fullStr | A novel ferroptosis-related gene signature for predicting prognosis in multiple myeloma |
title_full_unstemmed | A novel ferroptosis-related gene signature for predicting prognosis in multiple myeloma |
title_short | A novel ferroptosis-related gene signature for predicting prognosis in multiple myeloma |
title_sort | novel ferroptosis-related gene signature for predicting prognosis in multiple myeloma |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9950937/ https://www.ncbi.nlm.nih.gov/pubmed/36845727 http://dx.doi.org/10.3389/fonc.2023.999688 |
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