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Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2
Innovative point-of-care (PoC) diagnostic platforms are desirable to surpass the deficiencies of conventional laboratory diagnostic methods for bacterial infections and to tackle the growing antimicrobial resistance crisis. In this study, a workflow was implemented, comprising the identification of...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9951875/ https://www.ncbi.nlm.nih.gov/pubmed/36829672 http://dx.doi.org/10.3390/bioengineering10020178 |
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author | Sande, Maria G. Ferreira, Débora Rodrigues, Joana L. Melo, Luís D. R. Saragliadis, Athanasios Linke, Dirk Moreira, Felismina T. C. Sales, Maria Goreti F. Rodrigues, Ligia R. |
author_facet | Sande, Maria G. Ferreira, Débora Rodrigues, Joana L. Melo, Luís D. R. Saragliadis, Athanasios Linke, Dirk Moreira, Felismina T. C. Sales, Maria Goreti F. Rodrigues, Ligia R. |
author_sort | Sande, Maria G. |
collection | PubMed |
description | Innovative point-of-care (PoC) diagnostic platforms are desirable to surpass the deficiencies of conventional laboratory diagnostic methods for bacterial infections and to tackle the growing antimicrobial resistance crisis. In this study, a workflow was implemented, comprising the identification of new aptamers with high affinity for the ubiquitous surface protein A2 (UspA2) of the bacterial pathogen Moraxella catarrhalis and the development of an electrochemical biosensor functionalized with the best-performing aptamer as a bioreceptor to detect UspA2. After cell-systematic evolution of ligands by exponential enrichment (cell-SELEX) was performed, next-generation sequencing was used to sequence the final aptamer pool. The most frequent aptamer sequences were further evaluated using bioinformatic tools. The two most promising aptamer candidates, Apt1 and Apt1_RC (Apt1 reverse complement), had K(d) values of 214.4 and 3.4 nM, respectively. Finally, a simple and label-free electrochemical biosensor was functionalized with Apt1_RC. The aptasensor surface modifications were confirmed by impedance spectroscopy and cyclic voltammetry. The ability to detect UspA2 was evaluated by square wave voltammetry, exhibiting a linear detection range of 4.0 × 10(4)–7.0 × 10(7) CFU mL(−1), a square correlation coefficient superior to 0.99 and a limit of detection of 4.0 × 10(4) CFU mL(−1) at pH 5.0. The workflow described has the potential to be part of a sensitive PoC diagnostic platform to detect and quantify M. catarrhalis from biological samples. |
format | Online Article Text |
id | pubmed-9951875 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-99518752023-02-25 Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2 Sande, Maria G. Ferreira, Débora Rodrigues, Joana L. Melo, Luís D. R. Saragliadis, Athanasios Linke, Dirk Moreira, Felismina T. C. Sales, Maria Goreti F. Rodrigues, Ligia R. Bioengineering (Basel) Article Innovative point-of-care (PoC) diagnostic platforms are desirable to surpass the deficiencies of conventional laboratory diagnostic methods for bacterial infections and to tackle the growing antimicrobial resistance crisis. In this study, a workflow was implemented, comprising the identification of new aptamers with high affinity for the ubiquitous surface protein A2 (UspA2) of the bacterial pathogen Moraxella catarrhalis and the development of an electrochemical biosensor functionalized with the best-performing aptamer as a bioreceptor to detect UspA2. After cell-systematic evolution of ligands by exponential enrichment (cell-SELEX) was performed, next-generation sequencing was used to sequence the final aptamer pool. The most frequent aptamer sequences were further evaluated using bioinformatic tools. The two most promising aptamer candidates, Apt1 and Apt1_RC (Apt1 reverse complement), had K(d) values of 214.4 and 3.4 nM, respectively. Finally, a simple and label-free electrochemical biosensor was functionalized with Apt1_RC. The aptasensor surface modifications were confirmed by impedance spectroscopy and cyclic voltammetry. The ability to detect UspA2 was evaluated by square wave voltammetry, exhibiting a linear detection range of 4.0 × 10(4)–7.0 × 10(7) CFU mL(−1), a square correlation coefficient superior to 0.99 and a limit of detection of 4.0 × 10(4) CFU mL(−1) at pH 5.0. The workflow described has the potential to be part of a sensitive PoC diagnostic platform to detect and quantify M. catarrhalis from biological samples. MDPI 2023-01-31 /pmc/articles/PMC9951875/ /pubmed/36829672 http://dx.doi.org/10.3390/bioengineering10020178 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Sande, Maria G. Ferreira, Débora Rodrigues, Joana L. Melo, Luís D. R. Saragliadis, Athanasios Linke, Dirk Moreira, Felismina T. C. Sales, Maria Goreti F. Rodrigues, Ligia R. Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2 |
title | Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2 |
title_full | Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2 |
title_fullStr | Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2 |
title_full_unstemmed | Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2 |
title_short | Aptasensor for the Detection of Moraxella catarrhalis Adhesin UspA2 |
title_sort | aptasensor for the detection of moraxella catarrhalis adhesin uspa2 |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9951875/ https://www.ncbi.nlm.nih.gov/pubmed/36829672 http://dx.doi.org/10.3390/bioengineering10020178 |
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