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Deep-Learning-Based Automatic Segmentation of Parotid Gland on Computed Tomography Images

This study aims to develop an algorithm for the automatic segmentation of the parotid gland on CT images of the head and neck using U-Net architecture and to evaluate the model’s performance. In this retrospective study, a total of 30 anonymized CT volumes of the head and neck were sliced into 931 a...

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Autores principales: Önder, Merve, Evli, Cengiz, Türk, Ezgi, Kazan, Orhan, Bayrakdar, İbrahim Şevki, Çelik, Özer, Costa, Andre Luiz Ferreira, Gomes, João Pedro Perez, Ogawa, Celso Massahiro, Jagtap, Rohan, Orhan, Kaan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9955422/
https://www.ncbi.nlm.nih.gov/pubmed/36832069
http://dx.doi.org/10.3390/diagnostics13040581
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author Önder, Merve
Evli, Cengiz
Türk, Ezgi
Kazan, Orhan
Bayrakdar, İbrahim Şevki
Çelik, Özer
Costa, Andre Luiz Ferreira
Gomes, João Pedro Perez
Ogawa, Celso Massahiro
Jagtap, Rohan
Orhan, Kaan
author_facet Önder, Merve
Evli, Cengiz
Türk, Ezgi
Kazan, Orhan
Bayrakdar, İbrahim Şevki
Çelik, Özer
Costa, Andre Luiz Ferreira
Gomes, João Pedro Perez
Ogawa, Celso Massahiro
Jagtap, Rohan
Orhan, Kaan
author_sort Önder, Merve
collection PubMed
description This study aims to develop an algorithm for the automatic segmentation of the parotid gland on CT images of the head and neck using U-Net architecture and to evaluate the model’s performance. In this retrospective study, a total of 30 anonymized CT volumes of the head and neck were sliced into 931 axial images of the parotid glands. Ground truth labeling was performed with the CranioCatch Annotation Tool (CranioCatch, Eskisehir, Turkey) by two oral and maxillofacial radiologists. The images were resized to 512 × 512 and split into training (80%), validation (10%), and testing (10%) subgroups. A deep convolutional neural network model was developed using U-net architecture. The automatic segmentation performance was evaluated in terms of the F1-score, precision, sensitivity, and the Area Under Curve (AUC) statistics. The threshold for a successful segmentation was determined by the intersection of over 50% of the pixels with the ground truth. The F1-score, precision, and sensitivity of the AI model in segmenting the parotid glands in the axial CT slices were found to be 1. The AUC value was 0.96. This study has shown that it is possible to use AI models based on deep learning to automatically segment the parotid gland on axial CT images.
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spelling pubmed-99554222023-02-25 Deep-Learning-Based Automatic Segmentation of Parotid Gland on Computed Tomography Images Önder, Merve Evli, Cengiz Türk, Ezgi Kazan, Orhan Bayrakdar, İbrahim Şevki Çelik, Özer Costa, Andre Luiz Ferreira Gomes, João Pedro Perez Ogawa, Celso Massahiro Jagtap, Rohan Orhan, Kaan Diagnostics (Basel) Article This study aims to develop an algorithm for the automatic segmentation of the parotid gland on CT images of the head and neck using U-Net architecture and to evaluate the model’s performance. In this retrospective study, a total of 30 anonymized CT volumes of the head and neck were sliced into 931 axial images of the parotid glands. Ground truth labeling was performed with the CranioCatch Annotation Tool (CranioCatch, Eskisehir, Turkey) by two oral and maxillofacial radiologists. The images were resized to 512 × 512 and split into training (80%), validation (10%), and testing (10%) subgroups. A deep convolutional neural network model was developed using U-net architecture. The automatic segmentation performance was evaluated in terms of the F1-score, precision, sensitivity, and the Area Under Curve (AUC) statistics. The threshold for a successful segmentation was determined by the intersection of over 50% of the pixels with the ground truth. The F1-score, precision, and sensitivity of the AI model in segmenting the parotid glands in the axial CT slices were found to be 1. The AUC value was 0.96. This study has shown that it is possible to use AI models based on deep learning to automatically segment the parotid gland on axial CT images. MDPI 2023-02-04 /pmc/articles/PMC9955422/ /pubmed/36832069 http://dx.doi.org/10.3390/diagnostics13040581 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Önder, Merve
Evli, Cengiz
Türk, Ezgi
Kazan, Orhan
Bayrakdar, İbrahim Şevki
Çelik, Özer
Costa, Andre Luiz Ferreira
Gomes, João Pedro Perez
Ogawa, Celso Massahiro
Jagtap, Rohan
Orhan, Kaan
Deep-Learning-Based Automatic Segmentation of Parotid Gland on Computed Tomography Images
title Deep-Learning-Based Automatic Segmentation of Parotid Gland on Computed Tomography Images
title_full Deep-Learning-Based Automatic Segmentation of Parotid Gland on Computed Tomography Images
title_fullStr Deep-Learning-Based Automatic Segmentation of Parotid Gland on Computed Tomography Images
title_full_unstemmed Deep-Learning-Based Automatic Segmentation of Parotid Gland on Computed Tomography Images
title_short Deep-Learning-Based Automatic Segmentation of Parotid Gland on Computed Tomography Images
title_sort deep-learning-based automatic segmentation of parotid gland on computed tomography images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9955422/
https://www.ncbi.nlm.nih.gov/pubmed/36832069
http://dx.doi.org/10.3390/diagnostics13040581
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