Cargando…
Narrow Pore Crossing of Active Particles under Stochastic Resetting
We propose a two-dimensional model of biochemical activation process, whereby self-propelling particles of finite correlation times are injected at the center of a circular cavity with constant rate equal to the inverse of their lifetime; activation is triggered when one such particle hits a recepto...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9955654/ https://www.ncbi.nlm.nih.gov/pubmed/36832639 http://dx.doi.org/10.3390/e25020271 |
_version_ | 1784894399957696512 |
---|---|
author | Zhang, Weitao Li, Yunyun Marchesoni, Fabio Misko, Vyacheslav R. Ghosh, Pulak K. |
author_facet | Zhang, Weitao Li, Yunyun Marchesoni, Fabio Misko, Vyacheslav R. Ghosh, Pulak K. |
author_sort | Zhang, Weitao |
collection | PubMed |
description | We propose a two-dimensional model of biochemical activation process, whereby self-propelling particles of finite correlation times are injected at the center of a circular cavity with constant rate equal to the inverse of their lifetime; activation is triggered when one such particle hits a receptor on the cavity boundary, modeled as a narrow pore. We numerically investigated this process by computing the particle mean-first exit times through the cavity pore as a function of the correlation and injection time constants. Due to the breach of the circular symmetry associated with the positioning of the receptor, the exit times may depend on the orientation of the self-propelling velocity at injection. Stochastic resetting appears to favor activation for large particle correlation times, where most of the underlying diffusion process occurs at the cavity boundary. |
format | Online Article Text |
id | pubmed-9955654 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-99556542023-02-25 Narrow Pore Crossing of Active Particles under Stochastic Resetting Zhang, Weitao Li, Yunyun Marchesoni, Fabio Misko, Vyacheslav R. Ghosh, Pulak K. Entropy (Basel) Article We propose a two-dimensional model of biochemical activation process, whereby self-propelling particles of finite correlation times are injected at the center of a circular cavity with constant rate equal to the inverse of their lifetime; activation is triggered when one such particle hits a receptor on the cavity boundary, modeled as a narrow pore. We numerically investigated this process by computing the particle mean-first exit times through the cavity pore as a function of the correlation and injection time constants. Due to the breach of the circular symmetry associated with the positioning of the receptor, the exit times may depend on the orientation of the self-propelling velocity at injection. Stochastic resetting appears to favor activation for large particle correlation times, where most of the underlying diffusion process occurs at the cavity boundary. MDPI 2023-02-01 /pmc/articles/PMC9955654/ /pubmed/36832639 http://dx.doi.org/10.3390/e25020271 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Zhang, Weitao Li, Yunyun Marchesoni, Fabio Misko, Vyacheslav R. Ghosh, Pulak K. Narrow Pore Crossing of Active Particles under Stochastic Resetting |
title | Narrow Pore Crossing of Active Particles under Stochastic Resetting |
title_full | Narrow Pore Crossing of Active Particles under Stochastic Resetting |
title_fullStr | Narrow Pore Crossing of Active Particles under Stochastic Resetting |
title_full_unstemmed | Narrow Pore Crossing of Active Particles under Stochastic Resetting |
title_short | Narrow Pore Crossing of Active Particles under Stochastic Resetting |
title_sort | narrow pore crossing of active particles under stochastic resetting |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9955654/ https://www.ncbi.nlm.nih.gov/pubmed/36832639 http://dx.doi.org/10.3390/e25020271 |
work_keys_str_mv | AT zhangweitao narrowporecrossingofactiveparticlesunderstochasticresetting AT liyunyun narrowporecrossingofactiveparticlesunderstochasticresetting AT marchesonifabio narrowporecrossingofactiveparticlesunderstochasticresetting AT miskovyacheslavr narrowporecrossingofactiveparticlesunderstochasticresetting AT ghoshpulakk narrowporecrossingofactiveparticlesunderstochasticresetting |