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A Score-Based Approach for Training Schrödinger Bridges for Data Modelling

A Schrödinger bridge is a stochastic process connecting two given probability distributions over time. It has been recently applied as an approach for generative data modelling. The computational training of such bridges requires the repeated estimation of the drift function for a time-reversed stoc...

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Detalles Bibliográficos
Autores principales: Winkler, Ludwig, Ojeda, Cesar, Opper, Manfred
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9955847/
https://www.ncbi.nlm.nih.gov/pubmed/36832682
http://dx.doi.org/10.3390/e25020316
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author Winkler, Ludwig
Ojeda, Cesar
Opper, Manfred
author_facet Winkler, Ludwig
Ojeda, Cesar
Opper, Manfred
author_sort Winkler, Ludwig
collection PubMed
description A Schrödinger bridge is a stochastic process connecting two given probability distributions over time. It has been recently applied as an approach for generative data modelling. The computational training of such bridges requires the repeated estimation of the drift function for a time-reversed stochastic process using samples generated by the corresponding forward process. We introduce a modified score- function-based method for computing such reverse drifts, which can be efficiently implemented by a feed-forward neural network. We applied our approach to artificial datasets with increasing complexity. Finally, we evaluated its performance on genetic data, where Schrödinger bridges can be used to model the time evolution of single-cell RNA measurements.
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spelling pubmed-99558472023-02-25 A Score-Based Approach for Training Schrödinger Bridges for Data Modelling Winkler, Ludwig Ojeda, Cesar Opper, Manfred Entropy (Basel) Article A Schrödinger bridge is a stochastic process connecting two given probability distributions over time. It has been recently applied as an approach for generative data modelling. The computational training of such bridges requires the repeated estimation of the drift function for a time-reversed stochastic process using samples generated by the corresponding forward process. We introduce a modified score- function-based method for computing such reverse drifts, which can be efficiently implemented by a feed-forward neural network. We applied our approach to artificial datasets with increasing complexity. Finally, we evaluated its performance on genetic data, where Schrödinger bridges can be used to model the time evolution of single-cell RNA measurements. MDPI 2023-02-08 /pmc/articles/PMC9955847/ /pubmed/36832682 http://dx.doi.org/10.3390/e25020316 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Winkler, Ludwig
Ojeda, Cesar
Opper, Manfred
A Score-Based Approach for Training Schrödinger Bridges for Data Modelling
title A Score-Based Approach for Training Schrödinger Bridges for Data Modelling
title_full A Score-Based Approach for Training Schrödinger Bridges for Data Modelling
title_fullStr A Score-Based Approach for Training Schrödinger Bridges for Data Modelling
title_full_unstemmed A Score-Based Approach for Training Schrödinger Bridges for Data Modelling
title_short A Score-Based Approach for Training Schrödinger Bridges for Data Modelling
title_sort score-based approach for training schrödinger bridges for data modelling
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9955847/
https://www.ncbi.nlm.nih.gov/pubmed/36832682
http://dx.doi.org/10.3390/e25020316
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