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A Score-Based Approach for Training Schrödinger Bridges for Data Modelling
A Schrödinger bridge is a stochastic process connecting two given probability distributions over time. It has been recently applied as an approach for generative data modelling. The computational training of such bridges requires the repeated estimation of the drift function for a time-reversed stoc...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9955847/ https://www.ncbi.nlm.nih.gov/pubmed/36832682 http://dx.doi.org/10.3390/e25020316 |
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author | Winkler, Ludwig Ojeda, Cesar Opper, Manfred |
author_facet | Winkler, Ludwig Ojeda, Cesar Opper, Manfred |
author_sort | Winkler, Ludwig |
collection | PubMed |
description | A Schrödinger bridge is a stochastic process connecting two given probability distributions over time. It has been recently applied as an approach for generative data modelling. The computational training of such bridges requires the repeated estimation of the drift function for a time-reversed stochastic process using samples generated by the corresponding forward process. We introduce a modified score- function-based method for computing such reverse drifts, which can be efficiently implemented by a feed-forward neural network. We applied our approach to artificial datasets with increasing complexity. Finally, we evaluated its performance on genetic data, where Schrödinger bridges can be used to model the time evolution of single-cell RNA measurements. |
format | Online Article Text |
id | pubmed-9955847 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-99558472023-02-25 A Score-Based Approach for Training Schrödinger Bridges for Data Modelling Winkler, Ludwig Ojeda, Cesar Opper, Manfred Entropy (Basel) Article A Schrödinger bridge is a stochastic process connecting two given probability distributions over time. It has been recently applied as an approach for generative data modelling. The computational training of such bridges requires the repeated estimation of the drift function for a time-reversed stochastic process using samples generated by the corresponding forward process. We introduce a modified score- function-based method for computing such reverse drifts, which can be efficiently implemented by a feed-forward neural network. We applied our approach to artificial datasets with increasing complexity. Finally, we evaluated its performance on genetic data, where Schrödinger bridges can be used to model the time evolution of single-cell RNA measurements. MDPI 2023-02-08 /pmc/articles/PMC9955847/ /pubmed/36832682 http://dx.doi.org/10.3390/e25020316 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Winkler, Ludwig Ojeda, Cesar Opper, Manfred A Score-Based Approach for Training Schrödinger Bridges for Data Modelling |
title | A Score-Based Approach for Training Schrödinger Bridges for Data Modelling |
title_full | A Score-Based Approach for Training Schrödinger Bridges for Data Modelling |
title_fullStr | A Score-Based Approach for Training Schrödinger Bridges for Data Modelling |
title_full_unstemmed | A Score-Based Approach for Training Schrödinger Bridges for Data Modelling |
title_short | A Score-Based Approach for Training Schrödinger Bridges for Data Modelling |
title_sort | score-based approach for training schrödinger bridges for data modelling |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9955847/ https://www.ncbi.nlm.nih.gov/pubmed/36832682 http://dx.doi.org/10.3390/e25020316 |
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