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Computational Prediction of Protein Intrinsically Disordered Region Related Interactions and Functions

Intrinsically Disordered Proteins (IDPs) and Regions (IDRs) exist widely. Although without well-defined structures, they participate in many important biological processes. In addition, they are also widely related to human diseases and have become potential targets in drug discovery. However, there...

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Autores principales: Han, Bingqing, Ren, Chongjiao, Wang, Wenda, Li, Jiashan, Gong, Xinqi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9956190/
https://www.ncbi.nlm.nih.gov/pubmed/36833360
http://dx.doi.org/10.3390/genes14020432
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author Han, Bingqing
Ren, Chongjiao
Wang, Wenda
Li, Jiashan
Gong, Xinqi
author_facet Han, Bingqing
Ren, Chongjiao
Wang, Wenda
Li, Jiashan
Gong, Xinqi
author_sort Han, Bingqing
collection PubMed
description Intrinsically Disordered Proteins (IDPs) and Regions (IDRs) exist widely. Although without well-defined structures, they participate in many important biological processes. In addition, they are also widely related to human diseases and have become potential targets in drug discovery. However, there is a big gap between the experimental annotations related to IDPs/IDRs and their actual number. In recent decades, the computational methods related to IDPs/IDRs have been developed vigorously, including predicting IDPs/IDRs, the binding modes of IDPs/IDRs, the binding sites of IDPs/IDRs, and the molecular functions of IDPs/IDRs according to different tasks. In view of the correlation between these predictors, we have reviewed these prediction methods uniformly for the first time, summarized their computational methods and predictive performance, and discussed some problems and perspectives.
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spelling pubmed-99561902023-02-25 Computational Prediction of Protein Intrinsically Disordered Region Related Interactions and Functions Han, Bingqing Ren, Chongjiao Wang, Wenda Li, Jiashan Gong, Xinqi Genes (Basel) Review Intrinsically Disordered Proteins (IDPs) and Regions (IDRs) exist widely. Although without well-defined structures, they participate in many important biological processes. In addition, they are also widely related to human diseases and have become potential targets in drug discovery. However, there is a big gap between the experimental annotations related to IDPs/IDRs and their actual number. In recent decades, the computational methods related to IDPs/IDRs have been developed vigorously, including predicting IDPs/IDRs, the binding modes of IDPs/IDRs, the binding sites of IDPs/IDRs, and the molecular functions of IDPs/IDRs according to different tasks. In view of the correlation between these predictors, we have reviewed these prediction methods uniformly for the first time, summarized their computational methods and predictive performance, and discussed some problems and perspectives. MDPI 2023-02-08 /pmc/articles/PMC9956190/ /pubmed/36833360 http://dx.doi.org/10.3390/genes14020432 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Han, Bingqing
Ren, Chongjiao
Wang, Wenda
Li, Jiashan
Gong, Xinqi
Computational Prediction of Protein Intrinsically Disordered Region Related Interactions and Functions
title Computational Prediction of Protein Intrinsically Disordered Region Related Interactions and Functions
title_full Computational Prediction of Protein Intrinsically Disordered Region Related Interactions and Functions
title_fullStr Computational Prediction of Protein Intrinsically Disordered Region Related Interactions and Functions
title_full_unstemmed Computational Prediction of Protein Intrinsically Disordered Region Related Interactions and Functions
title_short Computational Prediction of Protein Intrinsically Disordered Region Related Interactions and Functions
title_sort computational prediction of protein intrinsically disordered region related interactions and functions
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9956190/
https://www.ncbi.nlm.nih.gov/pubmed/36833360
http://dx.doi.org/10.3390/genes14020432
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