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A systematic review of dengue outbreak prediction models: Current scenario and future directions

Dengue is among the fastest-spreading vector-borne infectious disease, with outbreaks often overwhelm the health system and result in huge morbidity and mortality in its endemic populations in the absence of an efficient warning system. A large number of prediction models are currently in use global...

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Autores principales: Leung, Xing Yu, Islam, Rakibul M., Adhami, Mohammadmehdi, Ilic, Dragan, McDonald, Lara, Palawaththa, Shanika, Diug, Basia, Munshi, Saif U., Karim, Md Nazmul
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9956653/
https://www.ncbi.nlm.nih.gov/pubmed/36780568
http://dx.doi.org/10.1371/journal.pntd.0010631
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author Leung, Xing Yu
Islam, Rakibul M.
Adhami, Mohammadmehdi
Ilic, Dragan
McDonald, Lara
Palawaththa, Shanika
Diug, Basia
Munshi, Saif U.
Karim, Md Nazmul
author_facet Leung, Xing Yu
Islam, Rakibul M.
Adhami, Mohammadmehdi
Ilic, Dragan
McDonald, Lara
Palawaththa, Shanika
Diug, Basia
Munshi, Saif U.
Karim, Md Nazmul
author_sort Leung, Xing Yu
collection PubMed
description Dengue is among the fastest-spreading vector-borne infectious disease, with outbreaks often overwhelm the health system and result in huge morbidity and mortality in its endemic populations in the absence of an efficient warning system. A large number of prediction models are currently in use globally. As such, this study aimed to systematically review the published literature that used quantitative models to predict dengue outbreaks and provide insights about the current practices. A systematic search was undertaken, using the Ovid MEDLINE, EMBASE, Scopus and Web of Science databases for published citations, without time or geographical restrictions. Study selection, data extraction and management process were devised in accordance with the ‘Checklist for Critical Appraisal and Data Extraction for Systematic Reviews of Prediction Modelling Studies’ (‘CHARMS’) framework. A total of 99 models were included in the review from 64 studies. Most models sourced climate (94.7%) and climate change (77.8%) data from agency reports and only 59.6% of the models adjusted for reporting time lag. All included models used climate predictors; 70.7% of them were built with only climate factors. Climate factors were used in combination with climate change factors (13.4%), both climate change and demographic factors (3.1%), vector factors (6.3%), and demographic factors (5.2%). Machine learning techniques were used for 39.4% of the models. Of these, random forest (15.4%), neural networks (23.1%) and ensemble models (10.3%) were notable. Among the statistical (60.6%) models, linear regression (18.3%), Poisson regression (18.3%), generalized additive models (16.7%) and time series/autoregressive models (26.7%) were notable. Around 20.2% of the models reported no validation at all and only 5.2% reported external validation. The reporting of methodology and model performance measures were inadequate in many of the existing prediction models. This review collates plausible predictors and methodological approaches, which will contribute to robust modelling in diverse settings and populations.
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spelling pubmed-99566532023-02-25 A systematic review of dengue outbreak prediction models: Current scenario and future directions Leung, Xing Yu Islam, Rakibul M. Adhami, Mohammadmehdi Ilic, Dragan McDonald, Lara Palawaththa, Shanika Diug, Basia Munshi, Saif U. Karim, Md Nazmul PLoS Negl Trop Dis Research Article Dengue is among the fastest-spreading vector-borne infectious disease, with outbreaks often overwhelm the health system and result in huge morbidity and mortality in its endemic populations in the absence of an efficient warning system. A large number of prediction models are currently in use globally. As such, this study aimed to systematically review the published literature that used quantitative models to predict dengue outbreaks and provide insights about the current practices. A systematic search was undertaken, using the Ovid MEDLINE, EMBASE, Scopus and Web of Science databases for published citations, without time or geographical restrictions. Study selection, data extraction and management process were devised in accordance with the ‘Checklist for Critical Appraisal and Data Extraction for Systematic Reviews of Prediction Modelling Studies’ (‘CHARMS’) framework. A total of 99 models were included in the review from 64 studies. Most models sourced climate (94.7%) and climate change (77.8%) data from agency reports and only 59.6% of the models adjusted for reporting time lag. All included models used climate predictors; 70.7% of them were built with only climate factors. Climate factors were used in combination with climate change factors (13.4%), both climate change and demographic factors (3.1%), vector factors (6.3%), and demographic factors (5.2%). Machine learning techniques were used for 39.4% of the models. Of these, random forest (15.4%), neural networks (23.1%) and ensemble models (10.3%) were notable. Among the statistical (60.6%) models, linear regression (18.3%), Poisson regression (18.3%), generalized additive models (16.7%) and time series/autoregressive models (26.7%) were notable. Around 20.2% of the models reported no validation at all and only 5.2% reported external validation. The reporting of methodology and model performance measures were inadequate in many of the existing prediction models. This review collates plausible predictors and methodological approaches, which will contribute to robust modelling in diverse settings and populations. Public Library of Science 2023-02-13 /pmc/articles/PMC9956653/ /pubmed/36780568 http://dx.doi.org/10.1371/journal.pntd.0010631 Text en © 2023 Leung et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Leung, Xing Yu
Islam, Rakibul M.
Adhami, Mohammadmehdi
Ilic, Dragan
McDonald, Lara
Palawaththa, Shanika
Diug, Basia
Munshi, Saif U.
Karim, Md Nazmul
A systematic review of dengue outbreak prediction models: Current scenario and future directions
title A systematic review of dengue outbreak prediction models: Current scenario and future directions
title_full A systematic review of dengue outbreak prediction models: Current scenario and future directions
title_fullStr A systematic review of dengue outbreak prediction models: Current scenario and future directions
title_full_unstemmed A systematic review of dengue outbreak prediction models: Current scenario and future directions
title_short A systematic review of dengue outbreak prediction models: Current scenario and future directions
title_sort systematic review of dengue outbreak prediction models: current scenario and future directions
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9956653/
https://www.ncbi.nlm.nih.gov/pubmed/36780568
http://dx.doi.org/10.1371/journal.pntd.0010631
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