Cargando…

Making the Genome Huge: The Case of Triatoma delpontei, a Triatominae Species with More than 50% of Its Genome Full of Satellite DNA

The genome of Triatoma delpontei Romaña & Abalos 1947 is the largest within Heteroptera, approximately two to three times greater than other evaluated Heteroptera genomes. Here, the repetitive fraction of the genome was determined and compared with its sister species Triatoma infestans Klug 1834...

Descripción completa

Detalles Bibliográficos
Autores principales: Mora, Pablo, Pita, Sebastián, Montiel, Eugenia E., Rico-Porras, José M., Palomeque, Teresa, Panzera, Francisco, Lorite, Pedro
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9957312/
https://www.ncbi.nlm.nih.gov/pubmed/36833298
http://dx.doi.org/10.3390/genes14020371
_version_ 1784894795508875264
author Mora, Pablo
Pita, Sebastián
Montiel, Eugenia E.
Rico-Porras, José M.
Palomeque, Teresa
Panzera, Francisco
Lorite, Pedro
author_facet Mora, Pablo
Pita, Sebastián
Montiel, Eugenia E.
Rico-Porras, José M.
Palomeque, Teresa
Panzera, Francisco
Lorite, Pedro
author_sort Mora, Pablo
collection PubMed
description The genome of Triatoma delpontei Romaña & Abalos 1947 is the largest within Heteroptera, approximately two to three times greater than other evaluated Heteroptera genomes. Here, the repetitive fraction of the genome was determined and compared with its sister species Triatoma infestans Klug 1834, in order to shed light on the karyotypic and genomic evolution of these species. The T. delpontei repeatome analysis showed that the most abundant component in its genome is satellite DNA, which makes up more than half of the genome. The T. delpontei satellitome includes 160 satellite DNA families, most of them also present in T. infestans. In both species, only a few satellite DNA families are overrepresented on the genome. These families are the building blocks of the C-heterochromatic regions. Two of these satellite DNA families that form the heterochromatin are the same in both species. However, there are satellite DNA families highly amplified in the heterochromatin of one species that in the other species are in low abundance and located in the euchromatin. Therefore, the present results depicted the great impact of the satellite DNA sequences in the evolution of Triatominae genomes. Within this scenario, satellitome determination and analysis led to a hypothesis that explains how satDNA sequences have grown on T. delpontei to reach its huge genome size within true bugs.
format Online
Article
Text
id pubmed-9957312
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-99573122023-02-25 Making the Genome Huge: The Case of Triatoma delpontei, a Triatominae Species with More than 50% of Its Genome Full of Satellite DNA Mora, Pablo Pita, Sebastián Montiel, Eugenia E. Rico-Porras, José M. Palomeque, Teresa Panzera, Francisco Lorite, Pedro Genes (Basel) Article The genome of Triatoma delpontei Romaña & Abalos 1947 is the largest within Heteroptera, approximately two to three times greater than other evaluated Heteroptera genomes. Here, the repetitive fraction of the genome was determined and compared with its sister species Triatoma infestans Klug 1834, in order to shed light on the karyotypic and genomic evolution of these species. The T. delpontei repeatome analysis showed that the most abundant component in its genome is satellite DNA, which makes up more than half of the genome. The T. delpontei satellitome includes 160 satellite DNA families, most of them also present in T. infestans. In both species, only a few satellite DNA families are overrepresented on the genome. These families are the building blocks of the C-heterochromatic regions. Two of these satellite DNA families that form the heterochromatin are the same in both species. However, there are satellite DNA families highly amplified in the heterochromatin of one species that in the other species are in low abundance and located in the euchromatin. Therefore, the present results depicted the great impact of the satellite DNA sequences in the evolution of Triatominae genomes. Within this scenario, satellitome determination and analysis led to a hypothesis that explains how satDNA sequences have grown on T. delpontei to reach its huge genome size within true bugs. MDPI 2023-01-31 /pmc/articles/PMC9957312/ /pubmed/36833298 http://dx.doi.org/10.3390/genes14020371 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Mora, Pablo
Pita, Sebastián
Montiel, Eugenia E.
Rico-Porras, José M.
Palomeque, Teresa
Panzera, Francisco
Lorite, Pedro
Making the Genome Huge: The Case of Triatoma delpontei, a Triatominae Species with More than 50% of Its Genome Full of Satellite DNA
title Making the Genome Huge: The Case of Triatoma delpontei, a Triatominae Species with More than 50% of Its Genome Full of Satellite DNA
title_full Making the Genome Huge: The Case of Triatoma delpontei, a Triatominae Species with More than 50% of Its Genome Full of Satellite DNA
title_fullStr Making the Genome Huge: The Case of Triatoma delpontei, a Triatominae Species with More than 50% of Its Genome Full of Satellite DNA
title_full_unstemmed Making the Genome Huge: The Case of Triatoma delpontei, a Triatominae Species with More than 50% of Its Genome Full of Satellite DNA
title_short Making the Genome Huge: The Case of Triatoma delpontei, a Triatominae Species with More than 50% of Its Genome Full of Satellite DNA
title_sort making the genome huge: the case of triatoma delpontei, a triatominae species with more than 50% of its genome full of satellite dna
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9957312/
https://www.ncbi.nlm.nih.gov/pubmed/36833298
http://dx.doi.org/10.3390/genes14020371
work_keys_str_mv AT morapablo makingthegenomehugethecaseoftriatomadelponteiatriatominaespecieswithmorethan50ofitsgenomefullofsatellitedna
AT pitasebastian makingthegenomehugethecaseoftriatomadelponteiatriatominaespecieswithmorethan50ofitsgenomefullofsatellitedna
AT montieleugeniae makingthegenomehugethecaseoftriatomadelponteiatriatominaespecieswithmorethan50ofitsgenomefullofsatellitedna
AT ricoporrasjosem makingthegenomehugethecaseoftriatomadelponteiatriatominaespecieswithmorethan50ofitsgenomefullofsatellitedna
AT palomequeteresa makingthegenomehugethecaseoftriatomadelponteiatriatominaespecieswithmorethan50ofitsgenomefullofsatellitedna
AT panzerafrancisco makingthegenomehugethecaseoftriatomadelponteiatriatominaespecieswithmorethan50ofitsgenomefullofsatellitedna
AT loritepedro makingthegenomehugethecaseoftriatomadelponteiatriatominaespecieswithmorethan50ofitsgenomefullofsatellitedna