Cargando…

Impact of Wavelet Kernels on Predictive Capability of Radiomic Features: A Case Study on COVID-19 Chest X-ray Images

Radiomic analysis allows for the detection of imaging biomarkers supporting decision-making processes in clinical environments, from diagnosis to prognosis. Frequently, the original set of radiomic features is augmented by considering high-level features, such as wavelet transforms. However, several...

Descripción completa

Detalles Bibliográficos
Autores principales: Prinzi, Francesco, Militello, Carmelo, Conti, Vincenzo, Vitabile, Salvatore
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9961017/
https://www.ncbi.nlm.nih.gov/pubmed/36826951
http://dx.doi.org/10.3390/jimaging9020032
_version_ 1784895651649159168
author Prinzi, Francesco
Militello, Carmelo
Conti, Vincenzo
Vitabile, Salvatore
author_facet Prinzi, Francesco
Militello, Carmelo
Conti, Vincenzo
Vitabile, Salvatore
author_sort Prinzi, Francesco
collection PubMed
description Radiomic analysis allows for the detection of imaging biomarkers supporting decision-making processes in clinical environments, from diagnosis to prognosis. Frequently, the original set of radiomic features is augmented by considering high-level features, such as wavelet transforms. However, several wavelets families (so called kernels) are able to generate different multi-resolution representations of the original image, and which of them produces more salient images is not yet clear. In this study, an in-depth analysis is performed by comparing different wavelet kernels and by evaluating their impact on predictive capabilities of radiomic models. A dataset composed of 1589 chest X-ray images was used for COVID-19 prognosis prediction as a case study. Random forest, support vector machine, and XGBoost were trained (on a subset of 1103 images) after a rigorous feature selection strategy to build-up the predictive models. Next, to evaluate the models generalization capability on unseen data, a test phase was performed (on a subset of 486 images). The experimental findings showed that Bior1.5, Coif1, Haar, and Sym2 kernels guarantee better and similar performance for all three machine learning models considered. Support vector machine and random forest showed comparable performance, and they were better than XGBoost. Additionally, random forest proved to be the most stable model, ensuring an appropriate balance between sensitivity and specificity.
format Online
Article
Text
id pubmed-9961017
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-99610172023-02-26 Impact of Wavelet Kernels on Predictive Capability of Radiomic Features: A Case Study on COVID-19 Chest X-ray Images Prinzi, Francesco Militello, Carmelo Conti, Vincenzo Vitabile, Salvatore J Imaging Article Radiomic analysis allows for the detection of imaging biomarkers supporting decision-making processes in clinical environments, from diagnosis to prognosis. Frequently, the original set of radiomic features is augmented by considering high-level features, such as wavelet transforms. However, several wavelets families (so called kernels) are able to generate different multi-resolution representations of the original image, and which of them produces more salient images is not yet clear. In this study, an in-depth analysis is performed by comparing different wavelet kernels and by evaluating their impact on predictive capabilities of radiomic models. A dataset composed of 1589 chest X-ray images was used for COVID-19 prognosis prediction as a case study. Random forest, support vector machine, and XGBoost were trained (on a subset of 1103 images) after a rigorous feature selection strategy to build-up the predictive models. Next, to evaluate the models generalization capability on unseen data, a test phase was performed (on a subset of 486 images). The experimental findings showed that Bior1.5, Coif1, Haar, and Sym2 kernels guarantee better and similar performance for all three machine learning models considered. Support vector machine and random forest showed comparable performance, and they were better than XGBoost. Additionally, random forest proved to be the most stable model, ensuring an appropriate balance between sensitivity and specificity. MDPI 2023-01-30 /pmc/articles/PMC9961017/ /pubmed/36826951 http://dx.doi.org/10.3390/jimaging9020032 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Prinzi, Francesco
Militello, Carmelo
Conti, Vincenzo
Vitabile, Salvatore
Impact of Wavelet Kernels on Predictive Capability of Radiomic Features: A Case Study on COVID-19 Chest X-ray Images
title Impact of Wavelet Kernels on Predictive Capability of Radiomic Features: A Case Study on COVID-19 Chest X-ray Images
title_full Impact of Wavelet Kernels on Predictive Capability of Radiomic Features: A Case Study on COVID-19 Chest X-ray Images
title_fullStr Impact of Wavelet Kernels on Predictive Capability of Radiomic Features: A Case Study on COVID-19 Chest X-ray Images
title_full_unstemmed Impact of Wavelet Kernels on Predictive Capability of Radiomic Features: A Case Study on COVID-19 Chest X-ray Images
title_short Impact of Wavelet Kernels on Predictive Capability of Radiomic Features: A Case Study on COVID-19 Chest X-ray Images
title_sort impact of wavelet kernels on predictive capability of radiomic features: a case study on covid-19 chest x-ray images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9961017/
https://www.ncbi.nlm.nih.gov/pubmed/36826951
http://dx.doi.org/10.3390/jimaging9020032
work_keys_str_mv AT prinzifrancesco impactofwaveletkernelsonpredictivecapabilityofradiomicfeaturesacasestudyoncovid19chestxrayimages
AT militellocarmelo impactofwaveletkernelsonpredictivecapabilityofradiomicfeaturesacasestudyoncovid19chestxrayimages
AT contivincenzo impactofwaveletkernelsonpredictivecapabilityofradiomicfeaturesacasestudyoncovid19chestxrayimages
AT vitabilesalvatore impactofwaveletkernelsonpredictivecapabilityofradiomicfeaturesacasestudyoncovid19chestxrayimages