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Comparative Genomics of Histoplasma capsulatum and Prediction of New Vaccines and Drug Targets
Histoplasma capsulatum is a thermodymorphic fungus that causes histoplasmosis, a systemic mycosis that presents different clinical manifestations, ranging from self-limiting to acute lung infection, chronic lung infection and disseminated infection. Usually, it affects severely immunocompromised pat...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9963733/ https://www.ncbi.nlm.nih.gov/pubmed/36836308 http://dx.doi.org/10.3390/jof9020193 |
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author | Almeida, Paula Cristina Silva Roque, Bruno Stelmastchuk Felice, Andrei Giacchetto Jaiswal, Arun Kumar Tiwari, Sandeep Azevedo, Vasco Silva-Vergara, Mario León de Castro Soares, Siomar Ferreira-Paim, Kennio Fonseca, Fernanda Machado |
author_facet | Almeida, Paula Cristina Silva Roque, Bruno Stelmastchuk Felice, Andrei Giacchetto Jaiswal, Arun Kumar Tiwari, Sandeep Azevedo, Vasco Silva-Vergara, Mario León de Castro Soares, Siomar Ferreira-Paim, Kennio Fonseca, Fernanda Machado |
author_sort | Almeida, Paula Cristina Silva |
collection | PubMed |
description | Histoplasma capsulatum is a thermodymorphic fungus that causes histoplasmosis, a systemic mycosis that presents different clinical manifestations, ranging from self-limiting to acute lung infection, chronic lung infection and disseminated infection. Usually, it affects severely immunocompromised patients although immunocompetent patients can also be infected. Currently, there are no vaccines to prevent histoplasmosis and the available antifungal treatment presents moderate to high toxicity. Additionally, there are few options of antifungal drugs. Thus, the aim of this study was to predict possible protein targets for the construction of potential vaccine candidates and predict potential drug targets against H. capsulatum. Whole genome sequences from four previously published H. capsulatum strains were analyzed and submitted to different bioinformatic approaches such as reverse vaccinology and subtractive genomics. A total of four proteins were characterized as good protein candidates (vaccine antigens) for vaccine development, three of which are membrane-bound and one is secreted. In addition, it was possible to predict four cytoplasmic proteins which were classified as good protein candidates and, through molecular docking performed for each identified target, we found four natural compounds that showed favorable interactions with our target proteins. Our study can help in the development of potential vaccines and new drugs that can change the current scenario of the treatment and prevention of histoplasmosis. |
format | Online Article Text |
id | pubmed-9963733 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-99637332023-02-26 Comparative Genomics of Histoplasma capsulatum and Prediction of New Vaccines and Drug Targets Almeida, Paula Cristina Silva Roque, Bruno Stelmastchuk Felice, Andrei Giacchetto Jaiswal, Arun Kumar Tiwari, Sandeep Azevedo, Vasco Silva-Vergara, Mario León de Castro Soares, Siomar Ferreira-Paim, Kennio Fonseca, Fernanda Machado J Fungi (Basel) Article Histoplasma capsulatum is a thermodymorphic fungus that causes histoplasmosis, a systemic mycosis that presents different clinical manifestations, ranging from self-limiting to acute lung infection, chronic lung infection and disseminated infection. Usually, it affects severely immunocompromised patients although immunocompetent patients can also be infected. Currently, there are no vaccines to prevent histoplasmosis and the available antifungal treatment presents moderate to high toxicity. Additionally, there are few options of antifungal drugs. Thus, the aim of this study was to predict possible protein targets for the construction of potential vaccine candidates and predict potential drug targets against H. capsulatum. Whole genome sequences from four previously published H. capsulatum strains were analyzed and submitted to different bioinformatic approaches such as reverse vaccinology and subtractive genomics. A total of four proteins were characterized as good protein candidates (vaccine antigens) for vaccine development, three of which are membrane-bound and one is secreted. In addition, it was possible to predict four cytoplasmic proteins which were classified as good protein candidates and, through molecular docking performed for each identified target, we found four natural compounds that showed favorable interactions with our target proteins. Our study can help in the development of potential vaccines and new drugs that can change the current scenario of the treatment and prevention of histoplasmosis. MDPI 2023-02-02 /pmc/articles/PMC9963733/ /pubmed/36836308 http://dx.doi.org/10.3390/jof9020193 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Almeida, Paula Cristina Silva Roque, Bruno Stelmastchuk Felice, Andrei Giacchetto Jaiswal, Arun Kumar Tiwari, Sandeep Azevedo, Vasco Silva-Vergara, Mario León de Castro Soares, Siomar Ferreira-Paim, Kennio Fonseca, Fernanda Machado Comparative Genomics of Histoplasma capsulatum and Prediction of New Vaccines and Drug Targets |
title | Comparative Genomics of Histoplasma capsulatum and Prediction of New Vaccines and Drug Targets |
title_full | Comparative Genomics of Histoplasma capsulatum and Prediction of New Vaccines and Drug Targets |
title_fullStr | Comparative Genomics of Histoplasma capsulatum and Prediction of New Vaccines and Drug Targets |
title_full_unstemmed | Comparative Genomics of Histoplasma capsulatum and Prediction of New Vaccines and Drug Targets |
title_short | Comparative Genomics of Histoplasma capsulatum and Prediction of New Vaccines and Drug Targets |
title_sort | comparative genomics of histoplasma capsulatum and prediction of new vaccines and drug targets |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9963733/ https://www.ncbi.nlm.nih.gov/pubmed/36836308 http://dx.doi.org/10.3390/jof9020193 |
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