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Current Progress, Applications and Challenges of Multi-Omics Approaches in Sesame Genetic Improvement
Sesame is one of the important traditional oil crops in the world, and has high economic and nutritional value. Recently, due to the novel high throughput sequencing techniques and bioinformatical methods, the study of the genomics, methylomics, transcriptomics, proteomics and metabonomics of sesame...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9965044/ https://www.ncbi.nlm.nih.gov/pubmed/36834516 http://dx.doi.org/10.3390/ijms24043105 |
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author | Li, Huan Tahir ul Qamar, Muhammad Yang, Li Liang, Junchao You, Jun Wang, Linhai |
author_facet | Li, Huan Tahir ul Qamar, Muhammad Yang, Li Liang, Junchao You, Jun Wang, Linhai |
author_sort | Li, Huan |
collection | PubMed |
description | Sesame is one of the important traditional oil crops in the world, and has high economic and nutritional value. Recently, due to the novel high throughput sequencing techniques and bioinformatical methods, the study of the genomics, methylomics, transcriptomics, proteomics and metabonomics of sesame has developed rapidly. Thus far, the genomes of five sesame accessions have been released, including white and black seed sesame. The genome studies reveal the function and structure of the sesame genome, and facilitate the exploitation of molecular markers, the construction of genetic maps and the study of pan-genomes. Methylomics focus on the study of the molecular level changes under different environmental conditions. Transcriptomics provide a powerful tool to study abiotic/biotic stress, organ development, and noncoding RNAs, and proteomics and metabonomics also provide some support in studying abiotic stress and important traits. In addition, the opportunities and challenges of multi-omics in sesame genetics breeding were also described. This review summarizes the current research status of sesame from the perspectives of multi-omics and hopes to provide help for further in-depth research on sesame. |
format | Online Article Text |
id | pubmed-9965044 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-99650442023-02-26 Current Progress, Applications and Challenges of Multi-Omics Approaches in Sesame Genetic Improvement Li, Huan Tahir ul Qamar, Muhammad Yang, Li Liang, Junchao You, Jun Wang, Linhai Int J Mol Sci Review Sesame is one of the important traditional oil crops in the world, and has high economic and nutritional value. Recently, due to the novel high throughput sequencing techniques and bioinformatical methods, the study of the genomics, methylomics, transcriptomics, proteomics and metabonomics of sesame has developed rapidly. Thus far, the genomes of five sesame accessions have been released, including white and black seed sesame. The genome studies reveal the function and structure of the sesame genome, and facilitate the exploitation of molecular markers, the construction of genetic maps and the study of pan-genomes. Methylomics focus on the study of the molecular level changes under different environmental conditions. Transcriptomics provide a powerful tool to study abiotic/biotic stress, organ development, and noncoding RNAs, and proteomics and metabonomics also provide some support in studying abiotic stress and important traits. In addition, the opportunities and challenges of multi-omics in sesame genetics breeding were also described. This review summarizes the current research status of sesame from the perspectives of multi-omics and hopes to provide help for further in-depth research on sesame. MDPI 2023-02-04 /pmc/articles/PMC9965044/ /pubmed/36834516 http://dx.doi.org/10.3390/ijms24043105 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Review Li, Huan Tahir ul Qamar, Muhammad Yang, Li Liang, Junchao You, Jun Wang, Linhai Current Progress, Applications and Challenges of Multi-Omics Approaches in Sesame Genetic Improvement |
title | Current Progress, Applications and Challenges of Multi-Omics Approaches in Sesame Genetic Improvement |
title_full | Current Progress, Applications and Challenges of Multi-Omics Approaches in Sesame Genetic Improvement |
title_fullStr | Current Progress, Applications and Challenges of Multi-Omics Approaches in Sesame Genetic Improvement |
title_full_unstemmed | Current Progress, Applications and Challenges of Multi-Omics Approaches in Sesame Genetic Improvement |
title_short | Current Progress, Applications and Challenges of Multi-Omics Approaches in Sesame Genetic Improvement |
title_sort | current progress, applications and challenges of multi-omics approaches in sesame genetic improvement |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9965044/ https://www.ncbi.nlm.nih.gov/pubmed/36834516 http://dx.doi.org/10.3390/ijms24043105 |
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