Cargando…

Current Progress, Applications and Challenges of Multi-Omics Approaches in Sesame Genetic Improvement

Sesame is one of the important traditional oil crops in the world, and has high economic and nutritional value. Recently, due to the novel high throughput sequencing techniques and bioinformatical methods, the study of the genomics, methylomics, transcriptomics, proteomics and metabonomics of sesame...

Descripción completa

Detalles Bibliográficos
Autores principales: Li, Huan, Tahir ul Qamar, Muhammad, Yang, Li, Liang, Junchao, You, Jun, Wang, Linhai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9965044/
https://www.ncbi.nlm.nih.gov/pubmed/36834516
http://dx.doi.org/10.3390/ijms24043105
_version_ 1784896659523633152
author Li, Huan
Tahir ul Qamar, Muhammad
Yang, Li
Liang, Junchao
You, Jun
Wang, Linhai
author_facet Li, Huan
Tahir ul Qamar, Muhammad
Yang, Li
Liang, Junchao
You, Jun
Wang, Linhai
author_sort Li, Huan
collection PubMed
description Sesame is one of the important traditional oil crops in the world, and has high economic and nutritional value. Recently, due to the novel high throughput sequencing techniques and bioinformatical methods, the study of the genomics, methylomics, transcriptomics, proteomics and metabonomics of sesame has developed rapidly. Thus far, the genomes of five sesame accessions have been released, including white and black seed sesame. The genome studies reveal the function and structure of the sesame genome, and facilitate the exploitation of molecular markers, the construction of genetic maps and the study of pan-genomes. Methylomics focus on the study of the molecular level changes under different environmental conditions. Transcriptomics provide a powerful tool to study abiotic/biotic stress, organ development, and noncoding RNAs, and proteomics and metabonomics also provide some support in studying abiotic stress and important traits. In addition, the opportunities and challenges of multi-omics in sesame genetics breeding were also described. This review summarizes the current research status of sesame from the perspectives of multi-omics and hopes to provide help for further in-depth research on sesame.
format Online
Article
Text
id pubmed-9965044
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-99650442023-02-26 Current Progress, Applications and Challenges of Multi-Omics Approaches in Sesame Genetic Improvement Li, Huan Tahir ul Qamar, Muhammad Yang, Li Liang, Junchao You, Jun Wang, Linhai Int J Mol Sci Review Sesame is one of the important traditional oil crops in the world, and has high economic and nutritional value. Recently, due to the novel high throughput sequencing techniques and bioinformatical methods, the study of the genomics, methylomics, transcriptomics, proteomics and metabonomics of sesame has developed rapidly. Thus far, the genomes of five sesame accessions have been released, including white and black seed sesame. The genome studies reveal the function and structure of the sesame genome, and facilitate the exploitation of molecular markers, the construction of genetic maps and the study of pan-genomes. Methylomics focus on the study of the molecular level changes under different environmental conditions. Transcriptomics provide a powerful tool to study abiotic/biotic stress, organ development, and noncoding RNAs, and proteomics and metabonomics also provide some support in studying abiotic stress and important traits. In addition, the opportunities and challenges of multi-omics in sesame genetics breeding were also described. This review summarizes the current research status of sesame from the perspectives of multi-omics and hopes to provide help for further in-depth research on sesame. MDPI 2023-02-04 /pmc/articles/PMC9965044/ /pubmed/36834516 http://dx.doi.org/10.3390/ijms24043105 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Li, Huan
Tahir ul Qamar, Muhammad
Yang, Li
Liang, Junchao
You, Jun
Wang, Linhai
Current Progress, Applications and Challenges of Multi-Omics Approaches in Sesame Genetic Improvement
title Current Progress, Applications and Challenges of Multi-Omics Approaches in Sesame Genetic Improvement
title_full Current Progress, Applications and Challenges of Multi-Omics Approaches in Sesame Genetic Improvement
title_fullStr Current Progress, Applications and Challenges of Multi-Omics Approaches in Sesame Genetic Improvement
title_full_unstemmed Current Progress, Applications and Challenges of Multi-Omics Approaches in Sesame Genetic Improvement
title_short Current Progress, Applications and Challenges of Multi-Omics Approaches in Sesame Genetic Improvement
title_sort current progress, applications and challenges of multi-omics approaches in sesame genetic improvement
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9965044/
https://www.ncbi.nlm.nih.gov/pubmed/36834516
http://dx.doi.org/10.3390/ijms24043105
work_keys_str_mv AT lihuan currentprogressapplicationsandchallengesofmultiomicsapproachesinsesamegeneticimprovement
AT tahirulqamarmuhammad currentprogressapplicationsandchallengesofmultiomicsapproachesinsesamegeneticimprovement
AT yangli currentprogressapplicationsandchallengesofmultiomicsapproachesinsesamegeneticimprovement
AT liangjunchao currentprogressapplicationsandchallengesofmultiomicsapproachesinsesamegeneticimprovement
AT youjun currentprogressapplicationsandchallengesofmultiomicsapproachesinsesamegeneticimprovement
AT wanglinhai currentprogressapplicationsandchallengesofmultiomicsapproachesinsesamegeneticimprovement