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Tailoring the Host Range of Ackermannviridae Bacteriophages through Chimeric Tailspike Proteins

Host range is a major determinant in the industrial utility of a bacteriophage. A model host range permits broad recognition across serovars of a target bacterium while avoiding cross-reactivity with commensal microbiota. Searching for a naturally occurring bacteriophage with ideal host ranges is ch...

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Autores principales: Gil, Jose, Paulson, John, Brown, Matthew, Zahn, Henriett, Nguyen, Minh M., Eisenberg, Marcia, Erickson, Stephen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9965104/
https://www.ncbi.nlm.nih.gov/pubmed/36851500
http://dx.doi.org/10.3390/v15020286
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author Gil, Jose
Paulson, John
Brown, Matthew
Zahn, Henriett
Nguyen, Minh M.
Eisenberg, Marcia
Erickson, Stephen
author_facet Gil, Jose
Paulson, John
Brown, Matthew
Zahn, Henriett
Nguyen, Minh M.
Eisenberg, Marcia
Erickson, Stephen
author_sort Gil, Jose
collection PubMed
description Host range is a major determinant in the industrial utility of a bacteriophage. A model host range permits broad recognition across serovars of a target bacterium while avoiding cross-reactivity with commensal microbiota. Searching for a naturally occurring bacteriophage with ideal host ranges is challenging, time-consuming, and restrictive. To address this, SPTD1.NL, a previously published luciferase reporter bacteriophage for Salmonella, was used to investigate manipulation of host range through receptor-binding protein engineering. Similar to related members of the Ackermannviridae bacteriophage family, SPTD1.NL possessed a receptor-binding protein gene cluster encoding four tailspike proteins, TSP1-4. Investigation of the native gene cluster through chimeric proteins identified TSP3 as the tailspike protein responsible for Salmonella detection. Further analysis of chimeric phages revealed that TSP2 contributed off-target Citrobacter recognition, whereas TSP1 and TSP4 were not essential for activity against any known host. To improve the host range of SPTD1.NL, TSP1 and TSP2 were sequentially replaced with chimeric receptor-binding proteins targeting Salmonella. This engineered construct, called RBP-SPTD1-3, was a superior diagnostic reporter, sensitively detecting additional Salmonella serovars while also demonstrating improved specificity. For industrial applications, bacteriophages of the Ackermannviridae family are thus uniquely versatile and may be engineered with multiple chimeric receptor-binding proteins to achieve a custom-tailored host range.
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spelling pubmed-99651042023-02-26 Tailoring the Host Range of Ackermannviridae Bacteriophages through Chimeric Tailspike Proteins Gil, Jose Paulson, John Brown, Matthew Zahn, Henriett Nguyen, Minh M. Eisenberg, Marcia Erickson, Stephen Viruses Article Host range is a major determinant in the industrial utility of a bacteriophage. A model host range permits broad recognition across serovars of a target bacterium while avoiding cross-reactivity with commensal microbiota. Searching for a naturally occurring bacteriophage with ideal host ranges is challenging, time-consuming, and restrictive. To address this, SPTD1.NL, a previously published luciferase reporter bacteriophage for Salmonella, was used to investigate manipulation of host range through receptor-binding protein engineering. Similar to related members of the Ackermannviridae bacteriophage family, SPTD1.NL possessed a receptor-binding protein gene cluster encoding four tailspike proteins, TSP1-4. Investigation of the native gene cluster through chimeric proteins identified TSP3 as the tailspike protein responsible for Salmonella detection. Further analysis of chimeric phages revealed that TSP2 contributed off-target Citrobacter recognition, whereas TSP1 and TSP4 were not essential for activity against any known host. To improve the host range of SPTD1.NL, TSP1 and TSP2 were sequentially replaced with chimeric receptor-binding proteins targeting Salmonella. This engineered construct, called RBP-SPTD1-3, was a superior diagnostic reporter, sensitively detecting additional Salmonella serovars while also demonstrating improved specificity. For industrial applications, bacteriophages of the Ackermannviridae family are thus uniquely versatile and may be engineered with multiple chimeric receptor-binding proteins to achieve a custom-tailored host range. MDPI 2023-01-19 /pmc/articles/PMC9965104/ /pubmed/36851500 http://dx.doi.org/10.3390/v15020286 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Gil, Jose
Paulson, John
Brown, Matthew
Zahn, Henriett
Nguyen, Minh M.
Eisenberg, Marcia
Erickson, Stephen
Tailoring the Host Range of Ackermannviridae Bacteriophages through Chimeric Tailspike Proteins
title Tailoring the Host Range of Ackermannviridae Bacteriophages through Chimeric Tailspike Proteins
title_full Tailoring the Host Range of Ackermannviridae Bacteriophages through Chimeric Tailspike Proteins
title_fullStr Tailoring the Host Range of Ackermannviridae Bacteriophages through Chimeric Tailspike Proteins
title_full_unstemmed Tailoring the Host Range of Ackermannviridae Bacteriophages through Chimeric Tailspike Proteins
title_short Tailoring the Host Range of Ackermannviridae Bacteriophages through Chimeric Tailspike Proteins
title_sort tailoring the host range of ackermannviridae bacteriophages through chimeric tailspike proteins
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9965104/
https://www.ncbi.nlm.nih.gov/pubmed/36851500
http://dx.doi.org/10.3390/v15020286
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