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Urbanization Reduces Phyllosphere Microbial Network Complexity and Species Richness of Camphor Trees
Studies on microbial communities associated with foliage in natural ecosystems have grown in number in recent years yet have rarely focused on urban ecosystems. With urbanization, phyllosphere microorganisms in the urban environment have come under pressures from increasing human activities. To expl...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9966171/ https://www.ncbi.nlm.nih.gov/pubmed/36838198 http://dx.doi.org/10.3390/microorganisms11020233 |
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author | Zhang, Yifang Li, Xiaomin Lu, Lu Huang, Fuyi Liu, Hao Zhang, Yu Yang, Luhua Usman, Muhammad Li, Shun |
author_facet | Zhang, Yifang Li, Xiaomin Lu, Lu Huang, Fuyi Liu, Hao Zhang, Yu Yang, Luhua Usman, Muhammad Li, Shun |
author_sort | Zhang, Yifang |
collection | PubMed |
description | Studies on microbial communities associated with foliage in natural ecosystems have grown in number in recent years yet have rarely focused on urban ecosystems. With urbanization, phyllosphere microorganisms in the urban environment have come under pressures from increasing human activities. To explore the effects of urbanization on the phyllosphere microbial communities of urban ecosystems, we investigated the phyllosphere microbial structure and the diversity of camphor trees in eight parks along a suburban-to-urban gradient. The results showed that the number of ASVs (amplicon sequence variants), unique on the phyllosphere microbial communities of three different urbanization gradients, was 4.54 to 17.99 times higher than that of the shared ASVs. Specific microbial biomarkers were also found for leaf samples from each urbanization gradient. Moreover, significant differences (R(2) = 0.133, p = 0.005) were observed in the phyllosphere microbial structure among the three urbanization gradients. Alpha diversity and co-occurrence patterns of bacterial communities showed that urbanization can strongly reduce the complexity and species richness of the phyllosphere microbial network of camphor trees. Correlation analysis with environmental factors showed that leaf total carbon (C), nitrogen (N), and sulfur (S), as well as leaf C/N, soil pH, and artificial light intensity at night (ALIAN) were the important drivers in determining the divergence of phyllosphere microbial communities across the urbanization gradient. Together, we found that urbanization can affect the composition of the phyllosphere bacterial community of camphor trees, and that the interplay between human activities and plant microbial communities may contribute to shaping the urban microbiome. |
format | Online Article Text |
id | pubmed-9966171 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-99661712023-02-26 Urbanization Reduces Phyllosphere Microbial Network Complexity and Species Richness of Camphor Trees Zhang, Yifang Li, Xiaomin Lu, Lu Huang, Fuyi Liu, Hao Zhang, Yu Yang, Luhua Usman, Muhammad Li, Shun Microorganisms Article Studies on microbial communities associated with foliage in natural ecosystems have grown in number in recent years yet have rarely focused on urban ecosystems. With urbanization, phyllosphere microorganisms in the urban environment have come under pressures from increasing human activities. To explore the effects of urbanization on the phyllosphere microbial communities of urban ecosystems, we investigated the phyllosphere microbial structure and the diversity of camphor trees in eight parks along a suburban-to-urban gradient. The results showed that the number of ASVs (amplicon sequence variants), unique on the phyllosphere microbial communities of three different urbanization gradients, was 4.54 to 17.99 times higher than that of the shared ASVs. Specific microbial biomarkers were also found for leaf samples from each urbanization gradient. Moreover, significant differences (R(2) = 0.133, p = 0.005) were observed in the phyllosphere microbial structure among the three urbanization gradients. Alpha diversity and co-occurrence patterns of bacterial communities showed that urbanization can strongly reduce the complexity and species richness of the phyllosphere microbial network of camphor trees. Correlation analysis with environmental factors showed that leaf total carbon (C), nitrogen (N), and sulfur (S), as well as leaf C/N, soil pH, and artificial light intensity at night (ALIAN) were the important drivers in determining the divergence of phyllosphere microbial communities across the urbanization gradient. Together, we found that urbanization can affect the composition of the phyllosphere bacterial community of camphor trees, and that the interplay between human activities and plant microbial communities may contribute to shaping the urban microbiome. MDPI 2023-01-17 /pmc/articles/PMC9966171/ /pubmed/36838198 http://dx.doi.org/10.3390/microorganisms11020233 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Zhang, Yifang Li, Xiaomin Lu, Lu Huang, Fuyi Liu, Hao Zhang, Yu Yang, Luhua Usman, Muhammad Li, Shun Urbanization Reduces Phyllosphere Microbial Network Complexity and Species Richness of Camphor Trees |
title | Urbanization Reduces Phyllosphere Microbial Network Complexity and Species Richness of Camphor Trees |
title_full | Urbanization Reduces Phyllosphere Microbial Network Complexity and Species Richness of Camphor Trees |
title_fullStr | Urbanization Reduces Phyllosphere Microbial Network Complexity and Species Richness of Camphor Trees |
title_full_unstemmed | Urbanization Reduces Phyllosphere Microbial Network Complexity and Species Richness of Camphor Trees |
title_short | Urbanization Reduces Phyllosphere Microbial Network Complexity and Species Richness of Camphor Trees |
title_sort | urbanization reduces phyllosphere microbial network complexity and species richness of camphor trees |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9966171/ https://www.ncbi.nlm.nih.gov/pubmed/36838198 http://dx.doi.org/10.3390/microorganisms11020233 |
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