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A Four-Step Platform to Optimize Growth Conditions for High-Yield Production of Siderophores in Cyanobacteria
In response to Iron deprivation and in specific environmental conditions, the cyanobacteria Anabaena flos aquae produce siderophores, iron-chelating molecules that in virtue of their interesting environmental and clinical applications, are recently gaining the interest of the pharmaceutical industry...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9967094/ https://www.ncbi.nlm.nih.gov/pubmed/36837773 http://dx.doi.org/10.3390/metabo13020154 |
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author | Kundu, Karishma Teta, Roberta Esposito, Germana Stornaiuolo, Mariano Costantino, Valeria |
author_facet | Kundu, Karishma Teta, Roberta Esposito, Germana Stornaiuolo, Mariano Costantino, Valeria |
author_sort | Kundu, Karishma |
collection | PubMed |
description | In response to Iron deprivation and in specific environmental conditions, the cyanobacteria Anabaena flos aquae produce siderophores, iron-chelating molecules that in virtue of their interesting environmental and clinical applications, are recently gaining the interest of the pharmaceutical industry. Yields of siderophore recovery from in vitro producing cyanobacterial cultures are, unfortunately, very low and reach most of the times only analytical quantities. We here propose a four-step experimental pipeline for a rapid and inexpensive identification and optimization of growth parameters influencing, at the transcriptional level, siderophore production in Anabaena flos aquae. The four-steps pipeline consists of: (1) identification of the promoter region of the operon of interest in the genome of Anabaena flos aquae; (2) cloning of the promoter in a recombinant DNA vector, upstream the cDNA coding for the Green Fluorescent Protein (GFP) followed by its stable transformation in Escherichia Coli; (3) identification of the environmental parameters affecting expression of the gene in Escherichia coli and their application to the cultivation of the Anabaena strain; (4) identification of siderophores by the combined use of high-resolution tandem mass spectrometry and molecular networking. This multidisciplinary, sustainable, and green pipeline is amenable to automation and is virtually applicable to any cyanobacteria, or more in general, to any microorganisms. |
format | Online Article Text |
id | pubmed-9967094 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-99670942023-02-26 A Four-Step Platform to Optimize Growth Conditions for High-Yield Production of Siderophores in Cyanobacteria Kundu, Karishma Teta, Roberta Esposito, Germana Stornaiuolo, Mariano Costantino, Valeria Metabolites Article In response to Iron deprivation and in specific environmental conditions, the cyanobacteria Anabaena flos aquae produce siderophores, iron-chelating molecules that in virtue of their interesting environmental and clinical applications, are recently gaining the interest of the pharmaceutical industry. Yields of siderophore recovery from in vitro producing cyanobacterial cultures are, unfortunately, very low and reach most of the times only analytical quantities. We here propose a four-step experimental pipeline for a rapid and inexpensive identification and optimization of growth parameters influencing, at the transcriptional level, siderophore production in Anabaena flos aquae. The four-steps pipeline consists of: (1) identification of the promoter region of the operon of interest in the genome of Anabaena flos aquae; (2) cloning of the promoter in a recombinant DNA vector, upstream the cDNA coding for the Green Fluorescent Protein (GFP) followed by its stable transformation in Escherichia Coli; (3) identification of the environmental parameters affecting expression of the gene in Escherichia coli and their application to the cultivation of the Anabaena strain; (4) identification of siderophores by the combined use of high-resolution tandem mass spectrometry and molecular networking. This multidisciplinary, sustainable, and green pipeline is amenable to automation and is virtually applicable to any cyanobacteria, or more in general, to any microorganisms. MDPI 2023-01-20 /pmc/articles/PMC9967094/ /pubmed/36837773 http://dx.doi.org/10.3390/metabo13020154 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Kundu, Karishma Teta, Roberta Esposito, Germana Stornaiuolo, Mariano Costantino, Valeria A Four-Step Platform to Optimize Growth Conditions for High-Yield Production of Siderophores in Cyanobacteria |
title | A Four-Step Platform to Optimize Growth Conditions for High-Yield Production of Siderophores in Cyanobacteria |
title_full | A Four-Step Platform to Optimize Growth Conditions for High-Yield Production of Siderophores in Cyanobacteria |
title_fullStr | A Four-Step Platform to Optimize Growth Conditions for High-Yield Production of Siderophores in Cyanobacteria |
title_full_unstemmed | A Four-Step Platform to Optimize Growth Conditions for High-Yield Production of Siderophores in Cyanobacteria |
title_short | A Four-Step Platform to Optimize Growth Conditions for High-Yield Production of Siderophores in Cyanobacteria |
title_sort | four-step platform to optimize growth conditions for high-yield production of siderophores in cyanobacteria |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9967094/ https://www.ncbi.nlm.nih.gov/pubmed/36837773 http://dx.doi.org/10.3390/metabo13020154 |
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