Cargando…

Interpersonal variability of the human gut virome confounds disease signal detection in IBD

Viruses are increasingly recognised as important components of the human microbiome, fulfilling numerous ecological roles including bacterial predation, immune stimulation, genetic diversification, horizontal gene transfer, microbial interactions, and augmentation of metabolic functions. However, ou...

Descripción completa

Detalles Bibliográficos
Autores principales:	Stockdale, Stephen R., Shkoporov, Andrey N., Khokhlova, Ekaterina V., Daly, Karen M., McDonnell, Siobhan A., O’ Regan, Orla, Nolan, James A., Sutton, Thomas D. S., Clooney, Adam G., Ryan, Feargal J., Sheehan, Donal, Lavelle, Aonghus, Draper, Lorraine A., Shanahan, Fergus, Ross, R. Paul, Hill, Colin
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group UK 2023
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9968284/ https://www.ncbi.nlm.nih.gov/pubmed/36841913 http://dx.doi.org/10.1038/s42003-023-04592-w

Ejemplares similares

Metagenomic assembled plasmids of the human microbiome vary across disease cohorts
por: Stockdale, S. R., et al.
Publicado: (2022)

An IBD-associated pathobiont synergises with NSAID to promote colitis which is blocked by NLRP3 inflammasome and Caspase-8 inhibitors
por: Singh, Raminder, et al.
Publicado: (2023)

Choice of assembly software has a critical impact on virome characterisation
por: Sutton, Thomas D. S., et al.
Publicado: (2019)

Viral biogeography of the mammalian gut and parenchymal organs
por: Shkoporov, Andrey N., et al.
Publicado: (2022)

Isolation and characterisation of ΦcrAss002, a crAss-like phage from the human gut that infects Bacteroides xylanisolvens
por: Guerin, Emma, et al.
Publicado: (2021)

Reproducible protocols for metagenomic analysis of human faecal phageomes
por: Shkoporov, Andrey N., et al.
Publicado: (2018)

ΦCrAss001 represents the most abundant bacteriophage family in the human gut and infects Bacteroides intestinalis
por: Shkoporov, Andrey N., et al.
Publicado: (2018)

Alpha-synuclein alters the faecal viromes of rats in a gut-initiated model of Parkinson’s disease
por: Stockdale, Stephen R., et al.
Publicado: (2021)

Ranking microbiome variance in inflammatory bowel disease: a large longitudinal intercontinental study
por: Clooney, Adam G, et al.
Publicado: (2021)

The Changing Phenotype of Inflammatory Bowel Disease
por: Moran, Carthage, et al.
Publicado: (2016)

Viromes of one year old infants reveal the impact of birth mode on microbiome diversity
por: McCann, Angela, et al.
Publicado: (2018)

Gut Microbiota beyond Bacteria—Mycobiome, Virome, Archaeome, and Eukaryotic Parasites in IBD
por: Matijašić, Mario, et al.
Publicado: (2020)

Expansion of known ssRNA phage genomes: From tens to over a thousand
por: Callanan, J., et al.
Publicado: (2020)

RNA Phage Biology in a Metagenomic Era
por: Callanan, Julie, et al.
Publicado: (2018)

Biases in Viral Metagenomics-Based Detection, Cataloguing and Quantification of Bacteriophage Genomes in Human Faeces, a Review
por: Callanan, Julie, et al.
Publicado: (2021)

Bacteriophages of the Order Crassvirales: What Do We Currently Know about This Keystone Component of the Human Gut Virome?
por: Smith, Linda, et al.
Publicado: (2023)

Isolation of a Novel Jumbo Bacteriophage Effective Against Klebsiella aerogenes
por: Lewis, Rhea, et al.
Publicado: (2020)

Fecal microbiota and bile acids in IBD patients undergoing screening for colorectal cancer
por: Lavelle, Aonghus, et al.
Publicado: (2022)

Regulation of CEACAM Family Members by IBD-Associated Triggers in Intestinal Epithelial Cells, Their Correlation to Inflammation and Relevance to IBD Pathogenesis
por: Saiz-Gonzalo, Gonzalo, et al.
Publicado: (2021)

The gut virome in Irritable Bowel Syndrome differs from that of controls
por: Coughlan, S., et al.
Publicado: (2021)

The use of informativity in the development of robust viromics-based examinations
por: Watkins, Siobhan C., et al.
Publicado: (2017)

Virome genomics: a tool for defining the human virome
por: Wylie, Kristine M, et al.
Publicado: (2013)

Temperate bacteriophages infecting the mucin-degrading bacterium Ruminococcus gnavus from the human gut
por: Buttimer, Colin, et al.
Publicado: (2023)

Changes in microbiota composition, bile and fatty acid metabolism, in successful faecal microbiota transplantation for Clostridioides difficile infection
por: Brown, Jillian R.-M., et al.
Publicado: (2018)

Aquarium Viromes: Viromes of Human-Managed Aquatic Systems
por: Kim, Yiseul, et al.
Publicado: (2017)

Computational Viromics: Applications of the Computational Biology in Viromics Studies
por: Lu, Congyu, et al.
Publicado: (2021)

Moderate-intensity aerobic and resistance exercise is safe and favorably influences body composition in patients with quiescent Inflammatory Bowel Disease: a randomized controlled cross-over trial
por: Cronin, Owen, et al.
Publicado: (2019)

The virome hunters
por: Schmidt, Charles
Publicado: (2018)

The Human Virome
por: Haynes, Matthew, et al.
Publicado: (2010)

Insights into the global freshwater virome
por: Elbehery, Ali H. A., et al.
Publicado: (2022)

The Gut Virome Database Reveals Age-Dependent Patterns of Virome Diversity in the Human Gut
por: Gregory, Ann C., et al.
Publicado: (2020)

Emerging view of the human virome
por: Wylie, Kristine M., et al.
Publicado: (2012)

Depth-Dependent Differences in Community Structure of the Human Colonic Microbiota in Health
por: Lavelle, Aonghus, et al.
Publicado: (2013)

Confounding
por: Andrade, Chittaranjan
Publicado: (2007)

Human virome: Implications in cancer
por: Tamayo-Trujillo, Rafael, et al.
Publicado: (2023)

The Impact of PPARγ Genetic Variants on IBD Susceptibility and IBD Disease Course
por: Mwinyi, Jessica, et al.
Publicado: (2012)

Interpersonal discrimination and depressive symptomatology: examination of several personality-related characteristics as potential confounders in a racial/ethnic heterogeneous adult sample
por: Hunte, Haslyn ER, et al.
Publicado: (2013)

Diverse Bacteriocins Produced by Strains From the Human Milk Microbiota
por: Angelopoulou, Angeliki, et al.
Publicado: (2020)

Leviviricetes: expanding and restructuring the taxonomy of bacteria-infecting single-stranded RNA viruses
por: Callanan, Julie, et al.
Publicado: (2021)

Probing the Viromic Frontiers
por: Rasmussen, Angela L.
Publicado: (2015)

Cannot write session to /tmp/vufind_sessions/sess_7aekt800q99lsiesdupgmnqeg7