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Fast reconstruction method of three-dimension model based on dual RGB-D cameras for peanut plant

BACKGROUND: Plant shape and structure are important factors in peanut breeding research. Constructing a three-dimension (3D) model can provide an effective digital tool for comprehensive and quantitative analysis of peanut plant structure. Fast and accurate are always the goals of the plant 3D model...

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Detalles Bibliográficos
Autores principales: Liu, Yadong, Yuan, Hongbo, Zhao, Xin, Fan, Caihu, Cheng, Man
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9969713/
https://www.ncbi.nlm.nih.gov/pubmed/36843020
http://dx.doi.org/10.1186/s13007-023-00998-z
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author Liu, Yadong
Yuan, Hongbo
Zhao, Xin
Fan, Caihu
Cheng, Man
author_facet Liu, Yadong
Yuan, Hongbo
Zhao, Xin
Fan, Caihu
Cheng, Man
author_sort Liu, Yadong
collection PubMed
description BACKGROUND: Plant shape and structure are important factors in peanut breeding research. Constructing a three-dimension (3D) model can provide an effective digital tool for comprehensive and quantitative analysis of peanut plant structure. Fast and accurate are always the goals of the plant 3D model reconstruction research. RESULTS: We proposed a 3D reconstruction method based on dual RGB-D cameras for the peanut plant 3D model quickly and accurately. The two Kinect v2 were mirror symmetry placed on both sides of the peanut plant, and the point cloud data obtained were filtered twice to remove noise interference. After rotation and translation based on the corresponding geometric relationship, the point cloud acquired by the two Kinect v2 was converted to the same coordinate system and spliced into the 3D structure of the peanut plant. The experiment was conducted at various growth stages based on twenty potted peanuts. The plant traits’ height, width, length, and volume were calculated through the reconstructed 3D models, and manual measurement was also carried out during the experiment processing. The accuracy of the 3D model was evaluated through a synthetic coefficient, which was generated by calculating the average accuracy of the four traits. The test result showed that the average accuracy of the reconstructed peanut plant 3D model by this method is 93.42%. A comparative experiment with the iterative closest point (ICP) algorithm, a widely used 3D modeling algorithm, was additionally implemented to test the rapidity of this method. The test result shows that the proposed method is 2.54 times faster with approximated accuracy compared to the ICP method. CONCLUSIONS: The reconstruction method for the 3D model of the peanut plant described in this paper is capable of rapidly and accurately establishing a 3D model of the peanut plant while also meeting the modeling requirements for other species' breeding processes. This study offers a potential tool to further explore the 3D model for improving traits and agronomic qualities of plants.
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spelling pubmed-99697132023-02-28 Fast reconstruction method of three-dimension model based on dual RGB-D cameras for peanut plant Liu, Yadong Yuan, Hongbo Zhao, Xin Fan, Caihu Cheng, Man Plant Methods Research BACKGROUND: Plant shape and structure are important factors in peanut breeding research. Constructing a three-dimension (3D) model can provide an effective digital tool for comprehensive and quantitative analysis of peanut plant structure. Fast and accurate are always the goals of the plant 3D model reconstruction research. RESULTS: We proposed a 3D reconstruction method based on dual RGB-D cameras for the peanut plant 3D model quickly and accurately. The two Kinect v2 were mirror symmetry placed on both sides of the peanut plant, and the point cloud data obtained were filtered twice to remove noise interference. After rotation and translation based on the corresponding geometric relationship, the point cloud acquired by the two Kinect v2 was converted to the same coordinate system and spliced into the 3D structure of the peanut plant. The experiment was conducted at various growth stages based on twenty potted peanuts. The plant traits’ height, width, length, and volume were calculated through the reconstructed 3D models, and manual measurement was also carried out during the experiment processing. The accuracy of the 3D model was evaluated through a synthetic coefficient, which was generated by calculating the average accuracy of the four traits. The test result showed that the average accuracy of the reconstructed peanut plant 3D model by this method is 93.42%. A comparative experiment with the iterative closest point (ICP) algorithm, a widely used 3D modeling algorithm, was additionally implemented to test the rapidity of this method. The test result shows that the proposed method is 2.54 times faster with approximated accuracy compared to the ICP method. CONCLUSIONS: The reconstruction method for the 3D model of the peanut plant described in this paper is capable of rapidly and accurately establishing a 3D model of the peanut plant while also meeting the modeling requirements for other species' breeding processes. This study offers a potential tool to further explore the 3D model for improving traits and agronomic qualities of plants. BioMed Central 2023-02-27 /pmc/articles/PMC9969713/ /pubmed/36843020 http://dx.doi.org/10.1186/s13007-023-00998-z Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Liu, Yadong
Yuan, Hongbo
Zhao, Xin
Fan, Caihu
Cheng, Man
Fast reconstruction method of three-dimension model based on dual RGB-D cameras for peanut plant
title Fast reconstruction method of three-dimension model based on dual RGB-D cameras for peanut plant
title_full Fast reconstruction method of three-dimension model based on dual RGB-D cameras for peanut plant
title_fullStr Fast reconstruction method of three-dimension model based on dual RGB-D cameras for peanut plant
title_full_unstemmed Fast reconstruction method of three-dimension model based on dual RGB-D cameras for peanut plant
title_short Fast reconstruction method of three-dimension model based on dual RGB-D cameras for peanut plant
title_sort fast reconstruction method of three-dimension model based on dual rgb-d cameras for peanut plant
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9969713/
https://www.ncbi.nlm.nih.gov/pubmed/36843020
http://dx.doi.org/10.1186/s13007-023-00998-z
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