The complete chloroplast genome sequence of Bambusa tuldoides f. swolleninternode (Poaceae: Bambuseae)

Bambusa tuldoides f. swolleninternode is an attractive ornamental bamboo species of southern China, with highly shortened and swollen at the base of internodes. In this study, the complete chloroplast genome of B. tuldoides was sequenced and reported for the first time. The complete genome size is 1...

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Autores principales: Wang, Ben, Qin, Bo, Sun, Kaidao, Huang, Xin, Bai, Shangbin, Zhou, Xiumei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2023
Materias:
Plastome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9970254/
https://www.ncbi.nlm.nih.gov/pubmed/36860478
http://dx.doi.org/10.1080/23802359.2023.2181648
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author Wang, Ben
Qin, Bo
Sun, Kaidao
Huang, Xin
Bai, Shangbin
Zhou, Xiumei
author_facet Wang, Ben
Qin, Bo
Sun, Kaidao
Huang, Xin
Bai, Shangbin
Zhou, Xiumei
author_sort Wang, Ben
collection PubMed
description Bambusa tuldoides f. swolleninternode is an attractive ornamental bamboo species of southern China, with highly shortened and swollen at the base of internodes. In this study, the complete chloroplast genome of B. tuldoides was sequenced and reported for the first time. The complete genome size is 139,460 base pairs (bp), including a large single-copy (LSC) region of 82,996 bp, a small single-copy (SSC) region of 12,876 bp and a pair of invert repeats (IR) regions of 21,794 bp. The plastid genome contained 132 genes, including 86 protein-coding genes, 38 tRNA genes and 8 rRNA genes. The overall GC content of the genome is 39%. The phylogenetic analysis revealed that B. tuldoides is closely related to B. dolichoclada, B. pachinensis var. hirsutissima, and B. utilis, three species in Bambusa based on 16 chloroplast genomes.
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spelling pubmed-99702542023-02-28 The complete chloroplast genome sequence of Bambusa tuldoides f. swolleninternode (Poaceae: Bambuseae) Wang, Ben Qin, Bo Sun, Kaidao Huang, Xin Bai, Shangbin Zhou, Xiumei Mitochondrial DNA B Resour Plastome Announcement Bambusa tuldoides f. swolleninternode is an attractive ornamental bamboo species of southern China, with highly shortened and swollen at the base of internodes. In this study, the complete chloroplast genome of B. tuldoides was sequenced and reported for the first time. The complete genome size is 139,460 base pairs (bp), including a large single-copy (LSC) region of 82,996 bp, a small single-copy (SSC) region of 12,876 bp and a pair of invert repeats (IR) regions of 21,794 bp. The plastid genome contained 132 genes, including 86 protein-coding genes, 38 tRNA genes and 8 rRNA genes. The overall GC content of the genome is 39%. The phylogenetic analysis revealed that B. tuldoides is closely related to B. dolichoclada, B. pachinensis var. hirsutissima, and B. utilis, three species in Bambusa based on 16 chloroplast genomes. Taylor & Francis 2023-02-24 /pmc/articles/PMC9970254/ /pubmed/36860478 http://dx.doi.org/10.1080/23802359.2023.2181648 Text en © 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plastome Announcement
Wang, Ben
Qin, Bo
Sun, Kaidao
Huang, Xin
Bai, Shangbin
Zhou, Xiumei
The complete chloroplast genome sequence of Bambusa tuldoides f. swolleninternode (Poaceae: Bambuseae)
title The complete chloroplast genome sequence of Bambusa tuldoides f. swolleninternode (Poaceae: Bambuseae)
title_full The complete chloroplast genome sequence of Bambusa tuldoides f. swolleninternode (Poaceae: Bambuseae)
title_fullStr The complete chloroplast genome sequence of Bambusa tuldoides f. swolleninternode (Poaceae: Bambuseae)
title_full_unstemmed The complete chloroplast genome sequence of Bambusa tuldoides f. swolleninternode (Poaceae: Bambuseae)
title_short The complete chloroplast genome sequence of Bambusa tuldoides f. swolleninternode (Poaceae: Bambuseae)
title_sort complete chloroplast genome sequence of bambusa tuldoides f. swolleninternode (poaceae: bambuseae)
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9970254/
https://www.ncbi.nlm.nih.gov/pubmed/36860478
http://dx.doi.org/10.1080/23802359.2023.2181648
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