Cargando…

Hybrid de novo genome assembly and comparative genomics of three different isolates of Gnomoniopsis castaneae

The first genome assemblies of Gnomoniopsis castaneae (syn. G. smithogilvyi), the causal agent of chestnut brown rot of kernels, shoot blight and cankers, are provided here. Specifically, the complete genome of the Italian ex-type MUT401 isolate was compared to the draft genome of a second Italian i...

Descripción completa

Detalles Bibliográficos
Autores principales:	Turco, Silvia, Mazzaglia, Angelo, Drais, Mounira Inas, Bastianelli, Giorgia, Gonthier, Paolo, Vannini, Andrea, Morales-Rodríguez, Carmen
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group UK 2023
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9971261/ https://www.ncbi.nlm.nih.gov/pubmed/36849528 http://dx.doi.org/10.1038/s41598-023-30496-0

Ejemplares similares

Impact of ‘brown rot’ caused by Gnomoniopsis castanea on chestnut fruits during the post‐harvest process: critical phases and proposed solutions
por: Morales‐Rodriguez, Carmen, et al.
Publicado: (2021)

Complete genome assembly of the levan‐positive strain PVFi1 of Pseudomonas savastanoi pv. savastanoi isolated from olive knots in Central Italy
por: Turco, Silvia, et al.
Publicado: (2022)

Draft Genome Sequence of a New Fusarium Isolate Belonging to Fusarium tricinctum Species Complex Collected From Hazelnut in Central Italy
por: Turco, Silvia, et al.
Publicado: (2021)

Rapid diagnostics for Gnomoniopsis smithogilvyi (syn. Gnomoniopsis castaneae) in chestnut nuts: new challenges by using LAMP and real-time PCR methods
por: Vettraino, Anna Maria, et al.
Publicado: (2021)

A quantitative PCR assay for the detection and quantification of Septoria pistaciarum, the causal agent of pistachio leaf spot in Italy
por: Drais, Mounira Inas, et al.
Publicado: (2023)

Hybrid de novo genome assembly of Chinese chestnut (Castanea mollissima)
por: Xing, Yu, et al.
Publicado: (2019)

Chromosome-level genome assembly provides new insights into Japanese chestnut (Castanea crenata) genomes
por: Wang, Jiawei, et al.
Publicado: (2022)

Morphology and Phylogeny of Gnomoniopsis (Gnomoniaceae, Diaporthales) from Fagaceae Leaves in China
por: Jiang, Ning, et al.
Publicado: (2021)

Chestnut Brown Rot and Gnomoniopsis smithogilvyi: Characterization of the Causal Agent in Portugal
por: Possamai, Guilherme, et al.
Publicado: (2023)

The complete chloroplast genome of Castanea mollissima ‘Chuizhili’
por: Zhang, Shijie, et al.
Publicado: (2021)

Efficient hybrid de novo assembly of human genomes with WENGAN
por: Di Genova, Alex, et al.
Publicado: (2020)

Construction of Pseudomolecules for the Chinese Chestnut (Castanea mollissima) Genome
por: Wang, Jinping, et al.
Publicado: (2020)

Complete mitochondrial genome of Niphades castanea (Coleoptera: Curculionidae)
por: Fu, Yue, et al.
Publicado: (2020)

The complete chloroplast genome of Castanea crenata Sieb. & Zucc
por: Kang, Min-Jeong, et al.
Publicado: (2019)

The complete chloroplast genome of Castanea sativa, an endemic to Europe
por: Xu, Haifeng, et al.
Publicado: (2021)

The complete chloroplast genome of Castanea sativa Mill. (Fagaceae)
por: Zhu, Cancan, et al.
Publicado: (2021)

Identification of Susceptibility Genes in Castanea sativa and Their Transcription Dynamics following Pathogen Infection
por: Pavese, Vera, et al.
Publicado: (2021)

The complete chloroplast genome sequence of a Castanea henryi cultivar
por: Li, Ying-Lin, et al.
Publicado: (2019)

Morphological and Phylogenetic Analyses Reveal Four New Species of Gnomoniopsis (Gnomoniaceae, Diaporthales) from China
por: Wang, Shi, et al.
Publicado: (2022)

A Hybrid Approach for de novo Human Genome Sequence Assembly and Phasing
por: Mostovoy, Yulia, et al.
Publicado: (2016)

Hybrid de novo genome assembly of the Chinese herbal fleabane Erigeron breviscapus
por: Yang, Jing, et al.
Publicado: (2017)

A hybrid de novo assembly of the sea pansy (Renilla muelleri) genome
por: Jiang, Justin B, et al.
Publicado: (2019)

Insights into the plateau adaptation of Salvia castanea by comparative genomic and WGCNA analyses
por: Xu, Ling, et al.
Publicado: (2022)

De Novo Assemblies of Three Oryza glaberrima Accessions Provide First Insights about Pan-Genome of African Rices
por: Monat, Cécile, et al.
Publicado: (2016)

De novo genome assemblies of butterflies
por: Ellis, Emily A, et al.
Publicado: (2021)

Deciphering Rhizosphere Microbiome Assembly of Castanea henryi in Plantation and Natural Forest
por: Cheng, Yuanyuan, et al.
Publicado: (2021)

Improved hybrid de novo genome assembly of domesticated apple (Malus x domestica)
por: Li, Xuewei, et al.
Publicado: (2016)

Multiple hybrid de novo genome assembly of finger millet, an orphan allotetraploid crop
por: Hatakeyama, Masaomi, et al.
Publicado: (2018)

Hybrid de novo whole-genome assembly and annotation of the model tapeworm Hymenolepis diminuta
por: Nowak, Robert M., et al.
Publicado: (2019)

De novo whole-genome assembly in an interspecific hybrid table grape, ‘Shine Muscat’
por: Shirasawa, Kenta, et al.
Publicado: (2022)

First Report on Genome Editing via Ribonucleoprotein (RNP) in Castanea sativa Mill.
por: Pavese, Vera, et al.
Publicado: (2022)

Gnomoniopsis chinensis (Gnomoniaceae, Diaporthales), a new fungus causing canker of Chinese chestnut in Hebei Province, China
por: Jiang, Ning, et al.
Publicado: (2020)

First interspecific genetic linkage map for Castanea sativa x Castanea crenata revealed QTLs for resistance to Phytophthora cinnamomi
por: Santos, Carmen, et al.
Publicado: (2017)

Chromosome-level genome assembly of Japanese chestnut (Castanea crenata Sieb. et Zucc.) reveals conserved chromosomal segments in woody rosids
por: Shirasawa, Kenta, et al.
Publicado: (2021)

Evaluation and validation of de novo and hybrid assembly techniques to derive high-quality genome sequences
por: Utturkar, Sagar M., et al.
Publicado: (2014)

Hybrid de novo genome assembly of the Chinese herbal plant danshen (Salvia miltiorrhiza Bunge)
por: Zhang, Guanghui, et al.
Publicado: (2015)

Oxford Nanopore sequencing, hybrid error correction, and de novo assembly of a eukaryotic genome
por: Goodwin, Sara, et al.
Publicado: (2015)

De novo hybrid assembly of the rubber tree genome reveals evidence of paleotetraploidy in Hevea species
por: Pootakham, Wirulda, et al.
Publicado: (2017)

A hybrid reference-guided de novo assembly approach for generating Cyclospora mitochondrion genomes
por: Gopinath, G. R., et al.
Publicado: (2018)

Hybrid de novo genome assembly and centromere characterization of the gray mouse lemur (Microcebus murinus)
por: Larsen, Peter A., et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_7936l9f5o1urq76biquvcgpg85