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Comprehensive genomic profiling: Does timing matter?

PURPOSE: There is variability in utilization of Comprehensive Genomic Profiling (CGP) in most of the metastatic solid tumors (MST). We evaluated the CGP utilization patterns and its impact on outcomes at an academic tertiary center. PATIENTS AND METHODS: Institutional database was reviewed for CGP d...

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Autores principales: Thapa, Bicky, Ahmed, Gulrayz, Szabo, Aniko, Kamgar, Mandana, Kilari, Deepak, Mehdi, Maahum, Menon, Smitha, Daniel, Sherin, Thompson, Jonathan, Thomas, James, George, Ben
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9971445/
https://www.ncbi.nlm.nih.gov/pubmed/36865796
http://dx.doi.org/10.3389/fonc.2023.1025367
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author Thapa, Bicky
Ahmed, Gulrayz
Szabo, Aniko
Kamgar, Mandana
Kilari, Deepak
Mehdi, Maahum
Menon, Smitha
Daniel, Sherin
Thompson, Jonathan
Thomas, James
George, Ben
author_facet Thapa, Bicky
Ahmed, Gulrayz
Szabo, Aniko
Kamgar, Mandana
Kilari, Deepak
Mehdi, Maahum
Menon, Smitha
Daniel, Sherin
Thompson, Jonathan
Thomas, James
George, Ben
author_sort Thapa, Bicky
collection PubMed
description PURPOSE: There is variability in utilization of Comprehensive Genomic Profiling (CGP) in most of the metastatic solid tumors (MST). We evaluated the CGP utilization patterns and its impact on outcomes at an academic tertiary center. PATIENTS AND METHODS: Institutional database was reviewed for CGP data in adult patients with MST between 01/2012 – 04/2020. Patients were categorized based on interval between CGP and metastatic diagnosis; 3 tertiles of distribution (T1-earliest to the diagnosis, T3-furthest), and pre-mets (CGP performed prior to diagnosis of metastasis). Overall survival (OS) was estimated from the time of metastatic diagnosis with left truncation at the time of CGP. Cox regression model was used to estimate the impact of timing of CGP on survival. RESULTS: Among 1,358 patients, 710 were female, 1,109 Caucasian, 186 Afro-Americans, and 36 Hispanic. The common histologies were lung cancer (254; 19%), colorectal cancer (203; 15%), gynecologic cancers (121; 8.9%), and pancreatic cancer (106; 7.8%). Time interval between diagnosis of metastatic disease and CGP was not statistically significantly different based on sex, race and ethnicity after adjusting for histologic diagnoses with 2 exceptions - Hispanics with lung cancer had delayed CGP compared to non-Hispanics (p =0.019) and females with pancreas cancer had delayed CGP compared to males (p =0.025). Lung cancer, gastro-esophageal cancer and gynecologic malignancies had better survival if they had CGP performed during the first tertile after metastatic diagnosis. CONCLUSION: CGP utilization across cancer types was equitable irrespective of sex, race and ethnicity. Early CGP after metastatic diagnosis might have effect on treatment delivery and clinical outcomes in cancer type with more actionable targets.
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spelling pubmed-99714452023-03-01 Comprehensive genomic profiling: Does timing matter? Thapa, Bicky Ahmed, Gulrayz Szabo, Aniko Kamgar, Mandana Kilari, Deepak Mehdi, Maahum Menon, Smitha Daniel, Sherin Thompson, Jonathan Thomas, James George, Ben Front Oncol Oncology PURPOSE: There is variability in utilization of Comprehensive Genomic Profiling (CGP) in most of the metastatic solid tumors (MST). We evaluated the CGP utilization patterns and its impact on outcomes at an academic tertiary center. PATIENTS AND METHODS: Institutional database was reviewed for CGP data in adult patients with MST between 01/2012 – 04/2020. Patients were categorized based on interval between CGP and metastatic diagnosis; 3 tertiles of distribution (T1-earliest to the diagnosis, T3-furthest), and pre-mets (CGP performed prior to diagnosis of metastasis). Overall survival (OS) was estimated from the time of metastatic diagnosis with left truncation at the time of CGP. Cox regression model was used to estimate the impact of timing of CGP on survival. RESULTS: Among 1,358 patients, 710 were female, 1,109 Caucasian, 186 Afro-Americans, and 36 Hispanic. The common histologies were lung cancer (254; 19%), colorectal cancer (203; 15%), gynecologic cancers (121; 8.9%), and pancreatic cancer (106; 7.8%). Time interval between diagnosis of metastatic disease and CGP was not statistically significantly different based on sex, race and ethnicity after adjusting for histologic diagnoses with 2 exceptions - Hispanics with lung cancer had delayed CGP compared to non-Hispanics (p =0.019) and females with pancreas cancer had delayed CGP compared to males (p =0.025). Lung cancer, gastro-esophageal cancer and gynecologic malignancies had better survival if they had CGP performed during the first tertile after metastatic diagnosis. CONCLUSION: CGP utilization across cancer types was equitable irrespective of sex, race and ethnicity. Early CGP after metastatic diagnosis might have effect on treatment delivery and clinical outcomes in cancer type with more actionable targets. Frontiers Media S.A. 2023-02-14 /pmc/articles/PMC9971445/ /pubmed/36865796 http://dx.doi.org/10.3389/fonc.2023.1025367 Text en Copyright © 2023 Thapa, Ahmed, Szabo, Kamgar, Kilari, Mehdi, Menon, Daniel, Thompson, Thomas and George https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Thapa, Bicky
Ahmed, Gulrayz
Szabo, Aniko
Kamgar, Mandana
Kilari, Deepak
Mehdi, Maahum
Menon, Smitha
Daniel, Sherin
Thompson, Jonathan
Thomas, James
George, Ben
Comprehensive genomic profiling: Does timing matter?
title Comprehensive genomic profiling: Does timing matter?
title_full Comprehensive genomic profiling: Does timing matter?
title_fullStr Comprehensive genomic profiling: Does timing matter?
title_full_unstemmed Comprehensive genomic profiling: Does timing matter?
title_short Comprehensive genomic profiling: Does timing matter?
title_sort comprehensive genomic profiling: does timing matter?
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9971445/
https://www.ncbi.nlm.nih.gov/pubmed/36865796
http://dx.doi.org/10.3389/fonc.2023.1025367
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