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Comprehensive genomic profiling: Does timing matter?
PURPOSE: There is variability in utilization of Comprehensive Genomic Profiling (CGP) in most of the metastatic solid tumors (MST). We evaluated the CGP utilization patterns and its impact on outcomes at an academic tertiary center. PATIENTS AND METHODS: Institutional database was reviewed for CGP d...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9971445/ https://www.ncbi.nlm.nih.gov/pubmed/36865796 http://dx.doi.org/10.3389/fonc.2023.1025367 |
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author | Thapa, Bicky Ahmed, Gulrayz Szabo, Aniko Kamgar, Mandana Kilari, Deepak Mehdi, Maahum Menon, Smitha Daniel, Sherin Thompson, Jonathan Thomas, James George, Ben |
author_facet | Thapa, Bicky Ahmed, Gulrayz Szabo, Aniko Kamgar, Mandana Kilari, Deepak Mehdi, Maahum Menon, Smitha Daniel, Sherin Thompson, Jonathan Thomas, James George, Ben |
author_sort | Thapa, Bicky |
collection | PubMed |
description | PURPOSE: There is variability in utilization of Comprehensive Genomic Profiling (CGP) in most of the metastatic solid tumors (MST). We evaluated the CGP utilization patterns and its impact on outcomes at an academic tertiary center. PATIENTS AND METHODS: Institutional database was reviewed for CGP data in adult patients with MST between 01/2012 – 04/2020. Patients were categorized based on interval between CGP and metastatic diagnosis; 3 tertiles of distribution (T1-earliest to the diagnosis, T3-furthest), and pre-mets (CGP performed prior to diagnosis of metastasis). Overall survival (OS) was estimated from the time of metastatic diagnosis with left truncation at the time of CGP. Cox regression model was used to estimate the impact of timing of CGP on survival. RESULTS: Among 1,358 patients, 710 were female, 1,109 Caucasian, 186 Afro-Americans, and 36 Hispanic. The common histologies were lung cancer (254; 19%), colorectal cancer (203; 15%), gynecologic cancers (121; 8.9%), and pancreatic cancer (106; 7.8%). Time interval between diagnosis of metastatic disease and CGP was not statistically significantly different based on sex, race and ethnicity after adjusting for histologic diagnoses with 2 exceptions - Hispanics with lung cancer had delayed CGP compared to non-Hispanics (p =0.019) and females with pancreas cancer had delayed CGP compared to males (p =0.025). Lung cancer, gastro-esophageal cancer and gynecologic malignancies had better survival if they had CGP performed during the first tertile after metastatic diagnosis. CONCLUSION: CGP utilization across cancer types was equitable irrespective of sex, race and ethnicity. Early CGP after metastatic diagnosis might have effect on treatment delivery and clinical outcomes in cancer type with more actionable targets. |
format | Online Article Text |
id | pubmed-9971445 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-99714452023-03-01 Comprehensive genomic profiling: Does timing matter? Thapa, Bicky Ahmed, Gulrayz Szabo, Aniko Kamgar, Mandana Kilari, Deepak Mehdi, Maahum Menon, Smitha Daniel, Sherin Thompson, Jonathan Thomas, James George, Ben Front Oncol Oncology PURPOSE: There is variability in utilization of Comprehensive Genomic Profiling (CGP) in most of the metastatic solid tumors (MST). We evaluated the CGP utilization patterns and its impact on outcomes at an academic tertiary center. PATIENTS AND METHODS: Institutional database was reviewed for CGP data in adult patients with MST between 01/2012 – 04/2020. Patients were categorized based on interval between CGP and metastatic diagnosis; 3 tertiles of distribution (T1-earliest to the diagnosis, T3-furthest), and pre-mets (CGP performed prior to diagnosis of metastasis). Overall survival (OS) was estimated from the time of metastatic diagnosis with left truncation at the time of CGP. Cox regression model was used to estimate the impact of timing of CGP on survival. RESULTS: Among 1,358 patients, 710 were female, 1,109 Caucasian, 186 Afro-Americans, and 36 Hispanic. The common histologies were lung cancer (254; 19%), colorectal cancer (203; 15%), gynecologic cancers (121; 8.9%), and pancreatic cancer (106; 7.8%). Time interval between diagnosis of metastatic disease and CGP was not statistically significantly different based on sex, race and ethnicity after adjusting for histologic diagnoses with 2 exceptions - Hispanics with lung cancer had delayed CGP compared to non-Hispanics (p =0.019) and females with pancreas cancer had delayed CGP compared to males (p =0.025). Lung cancer, gastro-esophageal cancer and gynecologic malignancies had better survival if they had CGP performed during the first tertile after metastatic diagnosis. CONCLUSION: CGP utilization across cancer types was equitable irrespective of sex, race and ethnicity. Early CGP after metastatic diagnosis might have effect on treatment delivery and clinical outcomes in cancer type with more actionable targets. Frontiers Media S.A. 2023-02-14 /pmc/articles/PMC9971445/ /pubmed/36865796 http://dx.doi.org/10.3389/fonc.2023.1025367 Text en Copyright © 2023 Thapa, Ahmed, Szabo, Kamgar, Kilari, Mehdi, Menon, Daniel, Thompson, Thomas and George https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Thapa, Bicky Ahmed, Gulrayz Szabo, Aniko Kamgar, Mandana Kilari, Deepak Mehdi, Maahum Menon, Smitha Daniel, Sherin Thompson, Jonathan Thomas, James George, Ben Comprehensive genomic profiling: Does timing matter? |
title | Comprehensive genomic profiling: Does timing matter? |
title_full | Comprehensive genomic profiling: Does timing matter? |
title_fullStr | Comprehensive genomic profiling: Does timing matter? |
title_full_unstemmed | Comprehensive genomic profiling: Does timing matter? |
title_short | Comprehensive genomic profiling: Does timing matter? |
title_sort | comprehensive genomic profiling: does timing matter? |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9971445/ https://www.ncbi.nlm.nih.gov/pubmed/36865796 http://dx.doi.org/10.3389/fonc.2023.1025367 |
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