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Quantifying robustness of CT-ventilation biomarkers to image noise
Purpose: To quantify the impact of image noise on CT-based lung ventilation biomarkers calculated using Jacobian determinant techniques. Methods: Five mechanically ventilated swine were imaged on a multi-row CT scanner with acquisition parameters of 120 kVp and 0.6 mm slice thickness in static and 4...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9971492/ https://www.ncbi.nlm.nih.gov/pubmed/36866176 http://dx.doi.org/10.3389/fphys.2023.1040028 |
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author | Flakus, Mattison J. Wuschner, Antonia E. Wallat, Eric M. Shao, Wei Shanmuganayagam, Dhanansayan Christensen, Gary E. Reinhardt, Joseph M. Li, Ke Bayouth, John E. |
author_facet | Flakus, Mattison J. Wuschner, Antonia E. Wallat, Eric M. Shao, Wei Shanmuganayagam, Dhanansayan Christensen, Gary E. Reinhardt, Joseph M. Li, Ke Bayouth, John E. |
author_sort | Flakus, Mattison J. |
collection | PubMed |
description | Purpose: To quantify the impact of image noise on CT-based lung ventilation biomarkers calculated using Jacobian determinant techniques. Methods: Five mechanically ventilated swine were imaged on a multi-row CT scanner with acquisition parameters of 120 kVp and 0.6 mm slice thickness in static and 4-dimensional CT (4DCT) modes with respective pitches of 1 and 0.09. A range of tube current time product (mAs) values were used to vary image dose. On two dates, subjects received two 4DCTs: one with 10 mAs/rotation (low-dose, high-noise) and one with CT simulation standard of care 100 mAs/rotation (high-dose, low-noise). Additionally, 10 intermediate noise level breath-hold (BHCT) scans were acquired with inspiratory and expiratory lung volumes. Images were reconstructed with and without iterative reconstruction (IR) using 1 mm slice thickness. The Jacobian determinant of an estimated transformation from a B-spline deformable image registration was used to create CT-ventilation biomarkers estimating lung tissue expansion. 24 CT-ventilation maps were generated per subject per scan date: four 4DCT ventilation maps (two noise levels each with and without IR) and 20 BHCT ventilation maps (10 noise levels each with and without IR). Biomarkers derived from reduced dose scans were registered to the reference full dose scan for comparison. Evaluation metrics were gamma pass rate (Γ) with 2 mm distance-to-agreement and 6% intensity criterion, voxel-wise Spearman correlation (ρ) and Jacobian ratio coefficient of variation (CoV ( JR )). Results: Comparing biomarkers derived from low (CTDI( vol ) = 6.07 mGy) and high (CTDI( vol ) = 60.7 mGy) dose 4DCT scans, mean Γ, ρ and CoV ( JR ) values were 93% ± 3%, 0.88 ± 0.03 and 0.04 ± 0.009, respectively. With IR applied, those values were 93% ± 4%, 0.90 ± 0.04 and 0.03 ± 0.003. Similarly, comparisons between BHCT-based biomarkers with variable dose (CTDI( vol ) = 1.35–7.95 mGy) had mean Γ, ρ and CoV ( JR ) of 93% ± 4%, 0.97 ± 0.02 and 0.03 ± 0.006 without IR and 93% ± 4%, 0.97 ± 0.03 and 0.03 ± 0.007 with IR. Applying IR did not significantly change any metrics (p [Formula: see text] 0.05). Discussion: This work demonstrated that CT-ventilation, calculated using the Jacobian determinant of an estimated transformation from a B-spline deformable image registration, is invariant to Hounsfield Unit (HU) variation caused by image noise. This advantageous finding may be leveraged clinically with potential applications including dose reduction and/or acquiring repeated low-dose acquisitions for improved ventilation characterization. |
format | Online Article Text |
id | pubmed-9971492 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-99714922023-03-01 Quantifying robustness of CT-ventilation biomarkers to image noise Flakus, Mattison J. Wuschner, Antonia E. Wallat, Eric M. Shao, Wei Shanmuganayagam, Dhanansayan Christensen, Gary E. Reinhardt, Joseph M. Li, Ke Bayouth, John E. Front Physiol Physiology Purpose: To quantify the impact of image noise on CT-based lung ventilation biomarkers calculated using Jacobian determinant techniques. Methods: Five mechanically ventilated swine were imaged on a multi-row CT scanner with acquisition parameters of 120 kVp and 0.6 mm slice thickness in static and 4-dimensional CT (4DCT) modes with respective pitches of 1 and 0.09. A range of tube current time product (mAs) values were used to vary image dose. On two dates, subjects received two 4DCTs: one with 10 mAs/rotation (low-dose, high-noise) and one with CT simulation standard of care 100 mAs/rotation (high-dose, low-noise). Additionally, 10 intermediate noise level breath-hold (BHCT) scans were acquired with inspiratory and expiratory lung volumes. Images were reconstructed with and without iterative reconstruction (IR) using 1 mm slice thickness. The Jacobian determinant of an estimated transformation from a B-spline deformable image registration was used to create CT-ventilation biomarkers estimating lung tissue expansion. 24 CT-ventilation maps were generated per subject per scan date: four 4DCT ventilation maps (two noise levels each with and without IR) and 20 BHCT ventilation maps (10 noise levels each with and without IR). Biomarkers derived from reduced dose scans were registered to the reference full dose scan for comparison. Evaluation metrics were gamma pass rate (Γ) with 2 mm distance-to-agreement and 6% intensity criterion, voxel-wise Spearman correlation (ρ) and Jacobian ratio coefficient of variation (CoV ( JR )). Results: Comparing biomarkers derived from low (CTDI( vol ) = 6.07 mGy) and high (CTDI( vol ) = 60.7 mGy) dose 4DCT scans, mean Γ, ρ and CoV ( JR ) values were 93% ± 3%, 0.88 ± 0.03 and 0.04 ± 0.009, respectively. With IR applied, those values were 93% ± 4%, 0.90 ± 0.04 and 0.03 ± 0.003. Similarly, comparisons between BHCT-based biomarkers with variable dose (CTDI( vol ) = 1.35–7.95 mGy) had mean Γ, ρ and CoV ( JR ) of 93% ± 4%, 0.97 ± 0.02 and 0.03 ± 0.006 without IR and 93% ± 4%, 0.97 ± 0.03 and 0.03 ± 0.007 with IR. Applying IR did not significantly change any metrics (p [Formula: see text] 0.05). Discussion: This work demonstrated that CT-ventilation, calculated using the Jacobian determinant of an estimated transformation from a B-spline deformable image registration, is invariant to Hounsfield Unit (HU) variation caused by image noise. This advantageous finding may be leveraged clinically with potential applications including dose reduction and/or acquiring repeated low-dose acquisitions for improved ventilation characterization. Frontiers Media S.A. 2023-02-14 /pmc/articles/PMC9971492/ /pubmed/36866176 http://dx.doi.org/10.3389/fphys.2023.1040028 Text en Copyright © 2023 Flakus, Wuschner, Wallat, Shao, Shanmuganayagam, Christensen, Reinhardt, Li and Bayouth. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Physiology Flakus, Mattison J. Wuschner, Antonia E. Wallat, Eric M. Shao, Wei Shanmuganayagam, Dhanansayan Christensen, Gary E. Reinhardt, Joseph M. Li, Ke Bayouth, John E. Quantifying robustness of CT-ventilation biomarkers to image noise |
title | Quantifying robustness of CT-ventilation biomarkers to image noise |
title_full | Quantifying robustness of CT-ventilation biomarkers to image noise |
title_fullStr | Quantifying robustness of CT-ventilation biomarkers to image noise |
title_full_unstemmed | Quantifying robustness of CT-ventilation biomarkers to image noise |
title_short | Quantifying robustness of CT-ventilation biomarkers to image noise |
title_sort | quantifying robustness of ct-ventilation biomarkers to image noise |
topic | Physiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9971492/ https://www.ncbi.nlm.nih.gov/pubmed/36866176 http://dx.doi.org/10.3389/fphys.2023.1040028 |
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