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Glucose metabolism and lncRNAs in breast cancer: Sworn friend
BACKGROUND: Glucose metabolism disorder is a common feature in cancer. Cancer cells generate much energy through anaerobic glycolysis, which promote the development of tumors. However, long non‐coding RNA may play an important role in this process. Our aim is to explore a prognostic risk model based...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9972110/ https://www.ncbi.nlm.nih.gov/pubmed/36426411 http://dx.doi.org/10.1002/cam4.5265 |
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author | Xu, Jia‐Lin Xu, Qi Wang, Ya‐Lin Xu, Di Xu, Wen‐Xiu Zhang, He‐Da Wang, Dan‐dan Tang, Jin‐Hai |
author_facet | Xu, Jia‐Lin Xu, Qi Wang, Ya‐Lin Xu, Di Xu, Wen‐Xiu Zhang, He‐Da Wang, Dan‐dan Tang, Jin‐Hai |
author_sort | Xu, Jia‐Lin |
collection | PubMed |
description | BACKGROUND: Glucose metabolism disorder is a common feature in cancer. Cancer cells generate much energy through anaerobic glycolysis, which promote the development of tumors. However, long non‐coding RNA may play an important role in this process. Our aim is to explore a prognostic risk model based on the glucose metabolism‐related lncRNAs which provides clues that lncRNAs predict a clinical outcome through glucose metabolism in breast cancer. METHODS: 1222 RNA‐seq were extracted from the TCGA database, and 74 glucose metabolism‐related genes were loaded from the GSEA website. Then, 7 glucose metabolism‐related lncRNAs risk score model was developed by univariate, Lasso, and multivariate regression analysis. The lncRNA risk model showed that high‐risk patients predict a poor clinical outcome with high reliability (P=2.838×10‐6). Univariate and multivariate independent prognostic analysis and ROC curve analysis proved that the risk score was an independent prognostic factor in breast cancer with an AUC value of 0.652. Finally, Gene set enrichment analysis showed that cell cycle‐related pathways were significantly enriched in a high‐risk group. RESULTS: Our results showed that glucose metabolism‐related lncRNAs can affect breast cancer progression. 7 glucose metabolism‐related lncRNAs prognostic signature was established to evaluate the OS of patients with breast cancer. PICSAR, LINC00839, AP001505.1, LINC00393 were risk factors and expressed highly in the high‐risk group. A Nomogram was made based on this signature to judge patients' living conditions and prognosis. CONCLUSION: 7 glucose metabolism‐related lncRNAs risk score model had a high prognostic value in breast cancer. PICSAR, LINC00839, AP001505.1, LINC00393 were risk factors. AP001505.1 expression was increased in most triple‐negative breast cancer cells treated with high glucose, which may also take part in breast cancer progression and potential therapeutic targets |
format | Online Article Text |
id | pubmed-9972110 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-99721102023-03-01 Glucose metabolism and lncRNAs in breast cancer: Sworn friend Xu, Jia‐Lin Xu, Qi Wang, Ya‐Lin Xu, Di Xu, Wen‐Xiu Zhang, He‐Da Wang, Dan‐dan Tang, Jin‐Hai Cancer Med Research Articles BACKGROUND: Glucose metabolism disorder is a common feature in cancer. Cancer cells generate much energy through anaerobic glycolysis, which promote the development of tumors. However, long non‐coding RNA may play an important role in this process. Our aim is to explore a prognostic risk model based on the glucose metabolism‐related lncRNAs which provides clues that lncRNAs predict a clinical outcome through glucose metabolism in breast cancer. METHODS: 1222 RNA‐seq were extracted from the TCGA database, and 74 glucose metabolism‐related genes were loaded from the GSEA website. Then, 7 glucose metabolism‐related lncRNAs risk score model was developed by univariate, Lasso, and multivariate regression analysis. The lncRNA risk model showed that high‐risk patients predict a poor clinical outcome with high reliability (P=2.838×10‐6). Univariate and multivariate independent prognostic analysis and ROC curve analysis proved that the risk score was an independent prognostic factor in breast cancer with an AUC value of 0.652. Finally, Gene set enrichment analysis showed that cell cycle‐related pathways were significantly enriched in a high‐risk group. RESULTS: Our results showed that glucose metabolism‐related lncRNAs can affect breast cancer progression. 7 glucose metabolism‐related lncRNAs prognostic signature was established to evaluate the OS of patients with breast cancer. PICSAR, LINC00839, AP001505.1, LINC00393 were risk factors and expressed highly in the high‐risk group. A Nomogram was made based on this signature to judge patients' living conditions and prognosis. CONCLUSION: 7 glucose metabolism‐related lncRNAs risk score model had a high prognostic value in breast cancer. PICSAR, LINC00839, AP001505.1, LINC00393 were risk factors. AP001505.1 expression was increased in most triple‐negative breast cancer cells treated with high glucose, which may also take part in breast cancer progression and potential therapeutic targets John Wiley and Sons Inc. 2022-11-24 /pmc/articles/PMC9972110/ /pubmed/36426411 http://dx.doi.org/10.1002/cam4.5265 Text en © 2022 The Authors. Cancer Medicine published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Xu, Jia‐Lin Xu, Qi Wang, Ya‐Lin Xu, Di Xu, Wen‐Xiu Zhang, He‐Da Wang, Dan‐dan Tang, Jin‐Hai Glucose metabolism and lncRNAs in breast cancer: Sworn friend |
title | Glucose metabolism and lncRNAs in breast cancer: Sworn friend |
title_full | Glucose metabolism and lncRNAs in breast cancer: Sworn friend |
title_fullStr | Glucose metabolism and lncRNAs in breast cancer: Sworn friend |
title_full_unstemmed | Glucose metabolism and lncRNAs in breast cancer: Sworn friend |
title_short | Glucose metabolism and lncRNAs in breast cancer: Sworn friend |
title_sort | glucose metabolism and lncrnas in breast cancer: sworn friend |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9972110/ https://www.ncbi.nlm.nih.gov/pubmed/36426411 http://dx.doi.org/10.1002/cam4.5265 |
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