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Glucose metabolism and lncRNAs in breast cancer: Sworn friend

BACKGROUND: Glucose metabolism disorder is a common feature in cancer. Cancer cells generate much energy through anaerobic glycolysis, which promote the development of tumors. However, long non‐coding RNA may play an important role in this process. Our aim is to explore a prognostic risk model based...

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Autores principales: Xu, Jia‐Lin, Xu, Qi, Wang, Ya‐Lin, Xu, Di, Xu, Wen‐Xiu, Zhang, He‐Da, Wang, Dan‐dan, Tang, Jin‐Hai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9972110/
https://www.ncbi.nlm.nih.gov/pubmed/36426411
http://dx.doi.org/10.1002/cam4.5265
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author Xu, Jia‐Lin
Xu, Qi
Wang, Ya‐Lin
Xu, Di
Xu, Wen‐Xiu
Zhang, He‐Da
Wang, Dan‐dan
Tang, Jin‐Hai
author_facet Xu, Jia‐Lin
Xu, Qi
Wang, Ya‐Lin
Xu, Di
Xu, Wen‐Xiu
Zhang, He‐Da
Wang, Dan‐dan
Tang, Jin‐Hai
author_sort Xu, Jia‐Lin
collection PubMed
description BACKGROUND: Glucose metabolism disorder is a common feature in cancer. Cancer cells generate much energy through anaerobic glycolysis, which promote the development of tumors. However, long non‐coding RNA may play an important role in this process. Our aim is to explore a prognostic risk model based on the glucose metabolism‐related lncRNAs which provides clues that lncRNAs predict a clinical outcome through glucose metabolism in breast cancer. METHODS: 1222 RNA‐seq were extracted from the TCGA database, and 74 glucose metabolism‐related genes were loaded from the GSEA website. Then, 7 glucose metabolism‐related lncRNAs risk score model was developed by univariate, Lasso, and multivariate regression analysis. The lncRNA risk model showed that high‐risk patients predict a poor clinical outcome with high reliability (P=2.838×10‐6). Univariate and multivariate independent prognostic analysis and ROC curve analysis proved that the risk score was an independent prognostic factor in breast cancer with an AUC value of 0.652. Finally, Gene set enrichment analysis showed that cell cycle‐related pathways were significantly enriched in a high‐risk group. RESULTS: Our results showed that glucose metabolism‐related lncRNAs can affect breast cancer progression. 7 glucose metabolism‐related lncRNAs prognostic signature was established to evaluate the OS of patients with breast cancer. PICSAR, LINC00839, AP001505.1, LINC00393 were risk factors and expressed highly in the high‐risk group. A Nomogram was made based on this signature to judge patients' living conditions and prognosis. CONCLUSION: 7 glucose metabolism‐related lncRNAs risk score model had a high prognostic value in breast cancer. PICSAR, LINC00839, AP001505.1, LINC00393 were risk factors. AP001505.1 expression was increased in most triple‐negative breast cancer cells treated with high glucose, which may also take part in breast cancer progression and potential therapeutic targets
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spelling pubmed-99721102023-03-01 Glucose metabolism and lncRNAs in breast cancer: Sworn friend Xu, Jia‐Lin Xu, Qi Wang, Ya‐Lin Xu, Di Xu, Wen‐Xiu Zhang, He‐Da Wang, Dan‐dan Tang, Jin‐Hai Cancer Med Research Articles BACKGROUND: Glucose metabolism disorder is a common feature in cancer. Cancer cells generate much energy through anaerobic glycolysis, which promote the development of tumors. However, long non‐coding RNA may play an important role in this process. Our aim is to explore a prognostic risk model based on the glucose metabolism‐related lncRNAs which provides clues that lncRNAs predict a clinical outcome through glucose metabolism in breast cancer. METHODS: 1222 RNA‐seq were extracted from the TCGA database, and 74 glucose metabolism‐related genes were loaded from the GSEA website. Then, 7 glucose metabolism‐related lncRNAs risk score model was developed by univariate, Lasso, and multivariate regression analysis. The lncRNA risk model showed that high‐risk patients predict a poor clinical outcome with high reliability (P=2.838×10‐6). Univariate and multivariate independent prognostic analysis and ROC curve analysis proved that the risk score was an independent prognostic factor in breast cancer with an AUC value of 0.652. Finally, Gene set enrichment analysis showed that cell cycle‐related pathways were significantly enriched in a high‐risk group. RESULTS: Our results showed that glucose metabolism‐related lncRNAs can affect breast cancer progression. 7 glucose metabolism‐related lncRNAs prognostic signature was established to evaluate the OS of patients with breast cancer. PICSAR, LINC00839, AP001505.1, LINC00393 were risk factors and expressed highly in the high‐risk group. A Nomogram was made based on this signature to judge patients' living conditions and prognosis. CONCLUSION: 7 glucose metabolism‐related lncRNAs risk score model had a high prognostic value in breast cancer. PICSAR, LINC00839, AP001505.1, LINC00393 were risk factors. AP001505.1 expression was increased in most triple‐negative breast cancer cells treated with high glucose, which may also take part in breast cancer progression and potential therapeutic targets John Wiley and Sons Inc. 2022-11-24 /pmc/articles/PMC9972110/ /pubmed/36426411 http://dx.doi.org/10.1002/cam4.5265 Text en © 2022 The Authors. Cancer Medicine published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Xu, Jia‐Lin
Xu, Qi
Wang, Ya‐Lin
Xu, Di
Xu, Wen‐Xiu
Zhang, He‐Da
Wang, Dan‐dan
Tang, Jin‐Hai
Glucose metabolism and lncRNAs in breast cancer: Sworn friend
title Glucose metabolism and lncRNAs in breast cancer: Sworn friend
title_full Glucose metabolism and lncRNAs in breast cancer: Sworn friend
title_fullStr Glucose metabolism and lncRNAs in breast cancer: Sworn friend
title_full_unstemmed Glucose metabolism and lncRNAs in breast cancer: Sworn friend
title_short Glucose metabolism and lncRNAs in breast cancer: Sworn friend
title_sort glucose metabolism and lncrnas in breast cancer: sworn friend
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9972110/
https://www.ncbi.nlm.nih.gov/pubmed/36426411
http://dx.doi.org/10.1002/cam4.5265
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