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RNA-seq reveals novel mechanistic targets of Livin in bladder cancer
BACKGROUND: Bladder cancer is a very common malignancy with a high recurrence rate. The survival of patients with muscle-invasive bladder cancer is poor, and new therapies are needed. Livin has been reported to be upregulated in bladder cancer and influence the proliferation of cancer cells. MATERIA...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9976429/ https://www.ncbi.nlm.nih.gov/pubmed/36855119 http://dx.doi.org/10.1186/s12894-023-01194-w |
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author | Li, Xianwen Fu, Chunhua Li, Guofeng He, Haolin |
author_facet | Li, Xianwen Fu, Chunhua Li, Guofeng He, Haolin |
author_sort | Li, Xianwen |
collection | PubMed |
description | BACKGROUND: Bladder cancer is a very common malignancy with a high recurrence rate. The survival of patients with muscle-invasive bladder cancer is poor, and new therapies are needed. Livin has been reported to be upregulated in bladder cancer and influence the proliferation of cancer cells. MATERIALS AND METHODS: The Livin gene in human bladder cancer cell line T24 was knocked out, and the differentially expressed genes were identified by RNA-seq and qPCR. RESULTS: Livin knockdown affects gene expression and has strong negative effects on some cancer-promoting pathways. Furthermore, combined with bladder cancer clinical sample data downloaded from TCGA and GEO, 2 co-up-regulated genes and 58 co-down-regulated genes were identified and validated, which were associated with cancer proliferation and invasion. CONCLUSION: All these results suggest that Livin plays an important role in bladder cancer and could be a potential anticancer target in clinical therapy. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12894-023-01194-w. |
format | Online Article Text |
id | pubmed-9976429 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-99764292023-03-02 RNA-seq reveals novel mechanistic targets of Livin in bladder cancer Li, Xianwen Fu, Chunhua Li, Guofeng He, Haolin BMC Urol Research BACKGROUND: Bladder cancer is a very common malignancy with a high recurrence rate. The survival of patients with muscle-invasive bladder cancer is poor, and new therapies are needed. Livin has been reported to be upregulated in bladder cancer and influence the proliferation of cancer cells. MATERIALS AND METHODS: The Livin gene in human bladder cancer cell line T24 was knocked out, and the differentially expressed genes were identified by RNA-seq and qPCR. RESULTS: Livin knockdown affects gene expression and has strong negative effects on some cancer-promoting pathways. Furthermore, combined with bladder cancer clinical sample data downloaded from TCGA and GEO, 2 co-up-regulated genes and 58 co-down-regulated genes were identified and validated, which were associated with cancer proliferation and invasion. CONCLUSION: All these results suggest that Livin plays an important role in bladder cancer and could be a potential anticancer target in clinical therapy. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12894-023-01194-w. BioMed Central 2023-02-28 /pmc/articles/PMC9976429/ /pubmed/36855119 http://dx.doi.org/10.1186/s12894-023-01194-w Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Li, Xianwen Fu, Chunhua Li, Guofeng He, Haolin RNA-seq reveals novel mechanistic targets of Livin in bladder cancer |
title | RNA-seq reveals novel mechanistic targets of Livin in bladder cancer |
title_full | RNA-seq reveals novel mechanistic targets of Livin in bladder cancer |
title_fullStr | RNA-seq reveals novel mechanistic targets of Livin in bladder cancer |
title_full_unstemmed | RNA-seq reveals novel mechanistic targets of Livin in bladder cancer |
title_short | RNA-seq reveals novel mechanistic targets of Livin in bladder cancer |
title_sort | rna-seq reveals novel mechanistic targets of livin in bladder cancer |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9976429/ https://www.ncbi.nlm.nih.gov/pubmed/36855119 http://dx.doi.org/10.1186/s12894-023-01194-w |
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