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RNA-seq reveals novel mechanistic targets of Livin in bladder cancer

BACKGROUND: Bladder cancer is a very common malignancy with a high recurrence rate. The survival of patients with muscle-invasive bladder cancer is poor, and new therapies are needed. Livin has been reported to be upregulated in bladder cancer and influence the proliferation of cancer cells. MATERIA...

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Autores principales: Li, Xianwen, Fu, Chunhua, Li, Guofeng, He, Haolin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9976429/
https://www.ncbi.nlm.nih.gov/pubmed/36855119
http://dx.doi.org/10.1186/s12894-023-01194-w
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author Li, Xianwen
Fu, Chunhua
Li, Guofeng
He, Haolin
author_facet Li, Xianwen
Fu, Chunhua
Li, Guofeng
He, Haolin
author_sort Li, Xianwen
collection PubMed
description BACKGROUND: Bladder cancer is a very common malignancy with a high recurrence rate. The survival of patients with muscle-invasive bladder cancer is poor, and new therapies are needed. Livin has been reported to be upregulated in bladder cancer and influence the proliferation of cancer cells. MATERIALS AND METHODS: The Livin gene in human bladder cancer cell line T24 was knocked out, and the differentially expressed genes were identified by RNA-seq and qPCR. RESULTS: Livin knockdown affects gene expression and has strong negative effects on some cancer-promoting pathways. Furthermore, combined with bladder cancer clinical sample data downloaded from TCGA and GEO, 2 co-up-regulated genes and 58 co-down-regulated genes were identified and validated, which were associated with cancer proliferation and invasion. CONCLUSION: All these results suggest that Livin plays an important role in bladder cancer and could be a potential anticancer target in clinical therapy. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12894-023-01194-w.
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spelling pubmed-99764292023-03-02 RNA-seq reveals novel mechanistic targets of Livin in bladder cancer Li, Xianwen Fu, Chunhua Li, Guofeng He, Haolin BMC Urol Research BACKGROUND: Bladder cancer is a very common malignancy with a high recurrence rate. The survival of patients with muscle-invasive bladder cancer is poor, and new therapies are needed. Livin has been reported to be upregulated in bladder cancer and influence the proliferation of cancer cells. MATERIALS AND METHODS: The Livin gene in human bladder cancer cell line T24 was knocked out, and the differentially expressed genes were identified by RNA-seq and qPCR. RESULTS: Livin knockdown affects gene expression and has strong negative effects on some cancer-promoting pathways. Furthermore, combined with bladder cancer clinical sample data downloaded from TCGA and GEO, 2 co-up-regulated genes and 58 co-down-regulated genes were identified and validated, which were associated with cancer proliferation and invasion. CONCLUSION: All these results suggest that Livin plays an important role in bladder cancer and could be a potential anticancer target in clinical therapy. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12894-023-01194-w. BioMed Central 2023-02-28 /pmc/articles/PMC9976429/ /pubmed/36855119 http://dx.doi.org/10.1186/s12894-023-01194-w Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Li, Xianwen
Fu, Chunhua
Li, Guofeng
He, Haolin
RNA-seq reveals novel mechanistic targets of Livin in bladder cancer
title RNA-seq reveals novel mechanistic targets of Livin in bladder cancer
title_full RNA-seq reveals novel mechanistic targets of Livin in bladder cancer
title_fullStr RNA-seq reveals novel mechanistic targets of Livin in bladder cancer
title_full_unstemmed RNA-seq reveals novel mechanistic targets of Livin in bladder cancer
title_short RNA-seq reveals novel mechanistic targets of Livin in bladder cancer
title_sort rna-seq reveals novel mechanistic targets of livin in bladder cancer
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9976429/
https://www.ncbi.nlm.nih.gov/pubmed/36855119
http://dx.doi.org/10.1186/s12894-023-01194-w
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