Cargando…

Role of immune cell infiltration and small molecule drugs in adhesive capsulitis: Novel exploration based on bioinformatics analyses

BACKGROUND: Adhesive capsulitis (AC) is a type of arthritis that causes shoulder joint pain, stiffness, and limited mobility. The pathogenesis of AC is still controversial. This study aims to explore the role of immune related factors in the occurrence and development of AC. METHODS: The AC dataset...

Descripción completa

Detalles Bibliográficos
Autores principales: Liu, Hailong, Yu, Baoxi, Deng, Zengfa, Zhao, Hang, Zeng, Anyu, Li, Ruiyun, Fu, Ming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9976580/
https://www.ncbi.nlm.nih.gov/pubmed/36875119
http://dx.doi.org/10.3389/fimmu.2023.1075395
_version_ 1784899117271482368
author Liu, Hailong
Yu, Baoxi
Deng, Zengfa
Zhao, Hang
Zeng, Anyu
Li, Ruiyun
Fu, Ming
author_facet Liu, Hailong
Yu, Baoxi
Deng, Zengfa
Zhao, Hang
Zeng, Anyu
Li, Ruiyun
Fu, Ming
author_sort Liu, Hailong
collection PubMed
description BACKGROUND: Adhesive capsulitis (AC) is a type of arthritis that causes shoulder joint pain, stiffness, and limited mobility. The pathogenesis of AC is still controversial. This study aims to explore the role of immune related factors in the occurrence and development of AC. METHODS: The AC dataset was downloaded from Gene Expression Omnibus (GEO) data repository. Differentially expressed immune-related genes (DEIRGs) were obtained based on R package “DESeq2” and Immport database. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) were performed to explore the functional correlation of DEIRGs. MCC method and Least Absolute Shrinkage and Selection Operator (LASSO) regression were conducted to identify the hub genes. The immune cell infiltration in shoulder joint capsule between AC and control was evaluated by CIBERSORTx, and the relationship between hub genes and infiltrating immune cells was analyzed by Spearman’s rank correlation. Finally, potential small molecule drugs for AC were screened by the Connectivity Map database (CMap) and further verified by molecular docking. RESULTS: A total of 137 DEIRGs and eight significantly different types of infiltrating immune cells (M0 macrophages, M1 macrophages, regulatory T cells, Tfh cells, monocytes, activated NK cells, memory resting CD4+T cells and resting dendritic cells) were screened between AC and control tissues. MMP9, FOS, SOCS3, and EGF were identified as potential targets for AC. MMP9 was negatively correlated with memory resting CD4+T cells and activated NK cells, but positively correlated with M0 macrophages. SOCS3 was positively correlated with M1 macrophages. FOS was positively correlated with M1 macrophages. EGF was positively correlated with monocytes. Additionally, dactolisib (ranked first) was identified as a potential small-molecule drug for the targeted therapy of AC. CONCLUSIONS: This is the first study on immune cell infiltration analysis in AC, and these findings may provide a new idea for the diagnosis and treatment of AC.
format Online
Article
Text
id pubmed-9976580
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-99765802023-03-02 Role of immune cell infiltration and small molecule drugs in adhesive capsulitis: Novel exploration based on bioinformatics analyses Liu, Hailong Yu, Baoxi Deng, Zengfa Zhao, Hang Zeng, Anyu Li, Ruiyun Fu, Ming Front Immunol Immunology BACKGROUND: Adhesive capsulitis (AC) is a type of arthritis that causes shoulder joint pain, stiffness, and limited mobility. The pathogenesis of AC is still controversial. This study aims to explore the role of immune related factors in the occurrence and development of AC. METHODS: The AC dataset was downloaded from Gene Expression Omnibus (GEO) data repository. Differentially expressed immune-related genes (DEIRGs) were obtained based on R package “DESeq2” and Immport database. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) were performed to explore the functional correlation of DEIRGs. MCC method and Least Absolute Shrinkage and Selection Operator (LASSO) regression were conducted to identify the hub genes. The immune cell infiltration in shoulder joint capsule between AC and control was evaluated by CIBERSORTx, and the relationship between hub genes and infiltrating immune cells was analyzed by Spearman’s rank correlation. Finally, potential small molecule drugs for AC were screened by the Connectivity Map database (CMap) and further verified by molecular docking. RESULTS: A total of 137 DEIRGs and eight significantly different types of infiltrating immune cells (M0 macrophages, M1 macrophages, regulatory T cells, Tfh cells, monocytes, activated NK cells, memory resting CD4+T cells and resting dendritic cells) were screened between AC and control tissues. MMP9, FOS, SOCS3, and EGF were identified as potential targets for AC. MMP9 was negatively correlated with memory resting CD4+T cells and activated NK cells, but positively correlated with M0 macrophages. SOCS3 was positively correlated with M1 macrophages. FOS was positively correlated with M1 macrophages. EGF was positively correlated with monocytes. Additionally, dactolisib (ranked first) was identified as a potential small-molecule drug for the targeted therapy of AC. CONCLUSIONS: This is the first study on immune cell infiltration analysis in AC, and these findings may provide a new idea for the diagnosis and treatment of AC. Frontiers Media S.A. 2023-02-09 /pmc/articles/PMC9976580/ /pubmed/36875119 http://dx.doi.org/10.3389/fimmu.2023.1075395 Text en Copyright © 2023 Liu, Yu, Deng, Zhao, Zeng, Li and Fu https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Immunology
Liu, Hailong
Yu, Baoxi
Deng, Zengfa
Zhao, Hang
Zeng, Anyu
Li, Ruiyun
Fu, Ming
Role of immune cell infiltration and small molecule drugs in adhesive capsulitis: Novel exploration based on bioinformatics analyses
title Role of immune cell infiltration and small molecule drugs in adhesive capsulitis: Novel exploration based on bioinformatics analyses
title_full Role of immune cell infiltration and small molecule drugs in adhesive capsulitis: Novel exploration based on bioinformatics analyses
title_fullStr Role of immune cell infiltration and small molecule drugs in adhesive capsulitis: Novel exploration based on bioinformatics analyses
title_full_unstemmed Role of immune cell infiltration and small molecule drugs in adhesive capsulitis: Novel exploration based on bioinformatics analyses
title_short Role of immune cell infiltration and small molecule drugs in adhesive capsulitis: Novel exploration based on bioinformatics analyses
title_sort role of immune cell infiltration and small molecule drugs in adhesive capsulitis: novel exploration based on bioinformatics analyses
topic Immunology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9976580/
https://www.ncbi.nlm.nih.gov/pubmed/36875119
http://dx.doi.org/10.3389/fimmu.2023.1075395
work_keys_str_mv AT liuhailong roleofimmunecellinfiltrationandsmallmoleculedrugsinadhesivecapsulitisnovelexplorationbasedonbioinformaticsanalyses
AT yubaoxi roleofimmunecellinfiltrationandsmallmoleculedrugsinadhesivecapsulitisnovelexplorationbasedonbioinformaticsanalyses
AT dengzengfa roleofimmunecellinfiltrationandsmallmoleculedrugsinadhesivecapsulitisnovelexplorationbasedonbioinformaticsanalyses
AT zhaohang roleofimmunecellinfiltrationandsmallmoleculedrugsinadhesivecapsulitisnovelexplorationbasedonbioinformaticsanalyses
AT zenganyu roleofimmunecellinfiltrationandsmallmoleculedrugsinadhesivecapsulitisnovelexplorationbasedonbioinformaticsanalyses
AT liruiyun roleofimmunecellinfiltrationandsmallmoleculedrugsinadhesivecapsulitisnovelexplorationbasedonbioinformaticsanalyses
AT fuming roleofimmunecellinfiltrationandsmallmoleculedrugsinadhesivecapsulitisnovelexplorationbasedonbioinformaticsanalyses