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Activatable G-quadruplex based catalases for signal transduction in biosensing
Discovery of oxidative catalysis with G-quadruplex•hemin constructs prompted a range of exciting developments in the field of biosensor design. Thus, G-quadruplex based DNAzymes with peroxidase activity found a niche as signal transduction modules in a wide range of analytical applications. The abil...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9976883/ https://www.ncbi.nlm.nih.gov/pubmed/36727464 http://dx.doi.org/10.1093/nar/gkad031 |
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author | Iwaniuk, Elzbieta E Adebayo, Thuwebat Coleman, Seth Villaros, Caitlin G Nesterova, Irina V |
author_facet | Iwaniuk, Elzbieta E Adebayo, Thuwebat Coleman, Seth Villaros, Caitlin G Nesterova, Irina V |
author_sort | Iwaniuk, Elzbieta E |
collection | PubMed |
description | Discovery of oxidative catalysis with G-quadruplex•hemin constructs prompted a range of exciting developments in the field of biosensor design. Thus, G-quadruplex based DNAzymes with peroxidase activity found a niche as signal transduction modules in a wide range of analytical applications. The ability of nucleic acid scaffolds to recognise a variety of practically meaningful markers and to translate the recognition events into conformational changes powers numerous sensor design possibilities. In this work, we establish a catalase activity of G-quadruplex•hemin scaffolds. Catalase activated hydrogen peroxide decomposition generates molecular oxygen that forms bubbles. Observation of bubbles is a truly equipment free signal readout platform that is highly desirable in limited resources or do-it-yourself environments. We take a preliminary insight into a G-quadruplex structure—folding topology—catalase activity correlation and establish efficient operating conditions. Further, we demonstrate the platform's potential as a signal transduction modality for reporting on biomolecular recognition using an oligonucleotide as a proof—of—concept target. Ultimately, activatable catalases based on G-quadruplex•hemin scaffolds promise to become valuable contributors towards accessible molecular diagnostics applications. |
format | Online Article Text |
id | pubmed-9976883 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-99768832023-03-02 Activatable G-quadruplex based catalases for signal transduction in biosensing Iwaniuk, Elzbieta E Adebayo, Thuwebat Coleman, Seth Villaros, Caitlin G Nesterova, Irina V Nucleic Acids Res Chemical Biology and Nucleic Acid Chemistry Discovery of oxidative catalysis with G-quadruplex•hemin constructs prompted a range of exciting developments in the field of biosensor design. Thus, G-quadruplex based DNAzymes with peroxidase activity found a niche as signal transduction modules in a wide range of analytical applications. The ability of nucleic acid scaffolds to recognise a variety of practically meaningful markers and to translate the recognition events into conformational changes powers numerous sensor design possibilities. In this work, we establish a catalase activity of G-quadruplex•hemin scaffolds. Catalase activated hydrogen peroxide decomposition generates molecular oxygen that forms bubbles. Observation of bubbles is a truly equipment free signal readout platform that is highly desirable in limited resources or do-it-yourself environments. We take a preliminary insight into a G-quadruplex structure—folding topology—catalase activity correlation and establish efficient operating conditions. Further, we demonstrate the platform's potential as a signal transduction modality for reporting on biomolecular recognition using an oligonucleotide as a proof—of—concept target. Ultimately, activatable catalases based on G-quadruplex•hemin scaffolds promise to become valuable contributors towards accessible molecular diagnostics applications. Oxford University Press 2023-02-02 /pmc/articles/PMC9976883/ /pubmed/36727464 http://dx.doi.org/10.1093/nar/gkad031 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of Nucleic Acids Research. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Chemical Biology and Nucleic Acid Chemistry Iwaniuk, Elzbieta E Adebayo, Thuwebat Coleman, Seth Villaros, Caitlin G Nesterova, Irina V Activatable G-quadruplex based catalases for signal transduction in biosensing |
title | Activatable G-quadruplex based catalases for signal transduction in biosensing |
title_full | Activatable G-quadruplex based catalases for signal transduction in biosensing |
title_fullStr | Activatable G-quadruplex based catalases for signal transduction in biosensing |
title_full_unstemmed | Activatable G-quadruplex based catalases for signal transduction in biosensing |
title_short | Activatable G-quadruplex based catalases for signal transduction in biosensing |
title_sort | activatable g-quadruplex based catalases for signal transduction in biosensing |
topic | Chemical Biology and Nucleic Acid Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9976883/ https://www.ncbi.nlm.nih.gov/pubmed/36727464 http://dx.doi.org/10.1093/nar/gkad031 |
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