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Genome-wide characterization of aldehyde dehydrogenase gene family members in groundnut (Arachis hypogaea) and the analysis under saline-alkali stress
Groundnut or peanut (Arachis hypogaea) is a legume crop. Its seeds are rich in protein and oil. Aldehyde dehydrogenase (ALDH, EC: 1.2.1.3) is an important enzyme involved in detoxification of aldehyde and cellular reactive oxygen species, as well as in attenuation of lipid peroxidation-meditated cel...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9978533/ https://www.ncbi.nlm.nih.gov/pubmed/36875623 http://dx.doi.org/10.3389/fpls.2023.1097001 |
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author | Zhang, Xiaoming Zhong, Jingwen Cao, Liang Ren, Chunyuan Yu, Gaobo Gu, Yanhua Ruan, Jingwen Zhao, Siqi Wang, Lei Ru, Haishun Cheng, Lili Wang, Qi Zhang, Yuxian |
author_facet | Zhang, Xiaoming Zhong, Jingwen Cao, Liang Ren, Chunyuan Yu, Gaobo Gu, Yanhua Ruan, Jingwen Zhao, Siqi Wang, Lei Ru, Haishun Cheng, Lili Wang, Qi Zhang, Yuxian |
author_sort | Zhang, Xiaoming |
collection | PubMed |
description | Groundnut or peanut (Arachis hypogaea) is a legume crop. Its seeds are rich in protein and oil. Aldehyde dehydrogenase (ALDH, EC: 1.2.1.3) is an important enzyme involved in detoxification of aldehyde and cellular reactive oxygen species, as well as in attenuation of lipid peroxidation-meditated cellular toxicity under stress conditions. However, few studies have been identified and analyzed about ALDH members in Arachis hypogaea. In the present study, 71 members of the ALDH superfamily (AhALDH) were identified using the reference genome obtained from the Phytozome database. A systematic analysis of the evolutionary relationship, motif, gene structure, cis-acting elements, collinearity, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment, and expression patterns was conducted to understand the structure and function of AhALDHs. AhALDHs exhibited tissue-specific expression, and quantitative real-time PCR identified significant differences in the expression levels of AhALDH members under saline-alkali stress. The results revealed that some AhALDHs members could be involved in response to abiotic stress. Our findings on AhALDHs provide insights for further study. |
format | Online Article Text |
id | pubmed-9978533 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-99785332023-03-03 Genome-wide characterization of aldehyde dehydrogenase gene family members in groundnut (Arachis hypogaea) and the analysis under saline-alkali stress Zhang, Xiaoming Zhong, Jingwen Cao, Liang Ren, Chunyuan Yu, Gaobo Gu, Yanhua Ruan, Jingwen Zhao, Siqi Wang, Lei Ru, Haishun Cheng, Lili Wang, Qi Zhang, Yuxian Front Plant Sci Plant Science Groundnut or peanut (Arachis hypogaea) is a legume crop. Its seeds are rich in protein and oil. Aldehyde dehydrogenase (ALDH, EC: 1.2.1.3) is an important enzyme involved in detoxification of aldehyde and cellular reactive oxygen species, as well as in attenuation of lipid peroxidation-meditated cellular toxicity under stress conditions. However, few studies have been identified and analyzed about ALDH members in Arachis hypogaea. In the present study, 71 members of the ALDH superfamily (AhALDH) were identified using the reference genome obtained from the Phytozome database. A systematic analysis of the evolutionary relationship, motif, gene structure, cis-acting elements, collinearity, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment, and expression patterns was conducted to understand the structure and function of AhALDHs. AhALDHs exhibited tissue-specific expression, and quantitative real-time PCR identified significant differences in the expression levels of AhALDH members under saline-alkali stress. The results revealed that some AhALDHs members could be involved in response to abiotic stress. Our findings on AhALDHs provide insights for further study. Frontiers Media S.A. 2023-02-16 /pmc/articles/PMC9978533/ /pubmed/36875623 http://dx.doi.org/10.3389/fpls.2023.1097001 Text en Copyright © 2023 Zhang, Zhong, Cao, Ren, Yu, Gu, Ruan, Zhao, Wang, Ru, Cheng, Wang and Zhang https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Zhang, Xiaoming Zhong, Jingwen Cao, Liang Ren, Chunyuan Yu, Gaobo Gu, Yanhua Ruan, Jingwen Zhao, Siqi Wang, Lei Ru, Haishun Cheng, Lili Wang, Qi Zhang, Yuxian Genome-wide characterization of aldehyde dehydrogenase gene family members in groundnut (Arachis hypogaea) and the analysis under saline-alkali stress |
title | Genome-wide characterization of aldehyde dehydrogenase gene family members in groundnut (Arachis hypogaea) and the analysis under saline-alkali stress |
title_full | Genome-wide characterization of aldehyde dehydrogenase gene family members in groundnut (Arachis hypogaea) and the analysis under saline-alkali stress |
title_fullStr | Genome-wide characterization of aldehyde dehydrogenase gene family members in groundnut (Arachis hypogaea) and the analysis under saline-alkali stress |
title_full_unstemmed | Genome-wide characterization of aldehyde dehydrogenase gene family members in groundnut (Arachis hypogaea) and the analysis under saline-alkali stress |
title_short | Genome-wide characterization of aldehyde dehydrogenase gene family members in groundnut (Arachis hypogaea) and the analysis under saline-alkali stress |
title_sort | genome-wide characterization of aldehyde dehydrogenase gene family members in groundnut (arachis hypogaea) and the analysis under saline-alkali stress |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9978533/ https://www.ncbi.nlm.nih.gov/pubmed/36875623 http://dx.doi.org/10.3389/fpls.2023.1097001 |
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