Cargando…

Comprehensive characterization of the embryonic factor LEUTX

The paired-like homeobox transcription factor LEUTX is expressed in human preimplantation embryos between the 4- and 8-cell stages, and then silenced in somatic tissues. To characterize the function of LEUTX, we performed a multiomic characterization of LEUTX using two proteomics methods and three g...

Descripción completa

Detalles Bibliográficos
Autores principales: Gawriyski, Lisa, Jouhilahti, Eeva-Mari, Yoshihara, Masahito, Fei, Liangru, Weltner, Jere, Airenne, Tomi T., Trokovic, Ras, Bhagat, Shruti, Tervaniemi, Mari H., Murakawa, Yasuhiro, Salokas, Kari, Liu, Xiaonan, Miettinen, Sini, Bürglin, Thomas R., Sahu, Biswajyoti, Otonkoski, Timo, Johnson, Mark S., Katayama, Shintaro, Varjosalo, Markku, Kere, Juha
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9978639/
https://www.ncbi.nlm.nih.gov/pubmed/36876139
http://dx.doi.org/10.1016/j.isci.2023.106172
_version_ 1784899564310888448
author Gawriyski, Lisa
Jouhilahti, Eeva-Mari
Yoshihara, Masahito
Fei, Liangru
Weltner, Jere
Airenne, Tomi T.
Trokovic, Ras
Bhagat, Shruti
Tervaniemi, Mari H.
Murakawa, Yasuhiro
Salokas, Kari
Liu, Xiaonan
Miettinen, Sini
Bürglin, Thomas R.
Sahu, Biswajyoti
Otonkoski, Timo
Johnson, Mark S.
Katayama, Shintaro
Varjosalo, Markku
Kere, Juha
author_facet Gawriyski, Lisa
Jouhilahti, Eeva-Mari
Yoshihara, Masahito
Fei, Liangru
Weltner, Jere
Airenne, Tomi T.
Trokovic, Ras
Bhagat, Shruti
Tervaniemi, Mari H.
Murakawa, Yasuhiro
Salokas, Kari
Liu, Xiaonan
Miettinen, Sini
Bürglin, Thomas R.
Sahu, Biswajyoti
Otonkoski, Timo
Johnson, Mark S.
Katayama, Shintaro
Varjosalo, Markku
Kere, Juha
author_sort Gawriyski, Lisa
collection PubMed
description The paired-like homeobox transcription factor LEUTX is expressed in human preimplantation embryos between the 4- and 8-cell stages, and then silenced in somatic tissues. To characterize the function of LEUTX, we performed a multiomic characterization of LEUTX using two proteomics methods and three genome-wide sequencing approaches. Our results show that LEUTX stably interacts with the EP300 and CBP histone acetyltransferases through its 9 amino acid transactivation domain (9aaTAD), as mutation of this domain abolishes the interactions. LEUTX targets genomic cis-regulatory sequences that overlap with repetitive elements, and through these elements it is suggested to regulate the expression of its downstream genes. We find LEUTX to be a transcriptional activator, upregulating several genes linked to preimplantation development as well as 8-cell-like markers, such as DPPA3 and ZNF280A. Our results support a role for LEUTX in preimplantation development as an enhancer binding protein and as a potent transcriptional activator.
format Online
Article
Text
id pubmed-9978639
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-99786392023-03-03 Comprehensive characterization of the embryonic factor LEUTX Gawriyski, Lisa Jouhilahti, Eeva-Mari Yoshihara, Masahito Fei, Liangru Weltner, Jere Airenne, Tomi T. Trokovic, Ras Bhagat, Shruti Tervaniemi, Mari H. Murakawa, Yasuhiro Salokas, Kari Liu, Xiaonan Miettinen, Sini Bürglin, Thomas R. Sahu, Biswajyoti Otonkoski, Timo Johnson, Mark S. Katayama, Shintaro Varjosalo, Markku Kere, Juha iScience Article The paired-like homeobox transcription factor LEUTX is expressed in human preimplantation embryos between the 4- and 8-cell stages, and then silenced in somatic tissues. To characterize the function of LEUTX, we performed a multiomic characterization of LEUTX using two proteomics methods and three genome-wide sequencing approaches. Our results show that LEUTX stably interacts with the EP300 and CBP histone acetyltransferases through its 9 amino acid transactivation domain (9aaTAD), as mutation of this domain abolishes the interactions. LEUTX targets genomic cis-regulatory sequences that overlap with repetitive elements, and through these elements it is suggested to regulate the expression of its downstream genes. We find LEUTX to be a transcriptional activator, upregulating several genes linked to preimplantation development as well as 8-cell-like markers, such as DPPA3 and ZNF280A. Our results support a role for LEUTX in preimplantation development as an enhancer binding protein and as a potent transcriptional activator. Elsevier 2023-02-09 /pmc/articles/PMC9978639/ /pubmed/36876139 http://dx.doi.org/10.1016/j.isci.2023.106172 Text en © 2023 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Gawriyski, Lisa
Jouhilahti, Eeva-Mari
Yoshihara, Masahito
Fei, Liangru
Weltner, Jere
Airenne, Tomi T.
Trokovic, Ras
Bhagat, Shruti
Tervaniemi, Mari H.
Murakawa, Yasuhiro
Salokas, Kari
Liu, Xiaonan
Miettinen, Sini
Bürglin, Thomas R.
Sahu, Biswajyoti
Otonkoski, Timo
Johnson, Mark S.
Katayama, Shintaro
Varjosalo, Markku
Kere, Juha
Comprehensive characterization of the embryonic factor LEUTX
title Comprehensive characterization of the embryonic factor LEUTX
title_full Comprehensive characterization of the embryonic factor LEUTX
title_fullStr Comprehensive characterization of the embryonic factor LEUTX
title_full_unstemmed Comprehensive characterization of the embryonic factor LEUTX
title_short Comprehensive characterization of the embryonic factor LEUTX
title_sort comprehensive characterization of the embryonic factor leutx
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9978639/
https://www.ncbi.nlm.nih.gov/pubmed/36876139
http://dx.doi.org/10.1016/j.isci.2023.106172
work_keys_str_mv AT gawriyskilisa comprehensivecharacterizationoftheembryonicfactorleutx
AT jouhilahtieevamari comprehensivecharacterizationoftheembryonicfactorleutx
AT yoshiharamasahito comprehensivecharacterizationoftheembryonicfactorleutx
AT feiliangru comprehensivecharacterizationoftheembryonicfactorleutx
AT weltnerjere comprehensivecharacterizationoftheembryonicfactorleutx
AT airennetomit comprehensivecharacterizationoftheembryonicfactorleutx
AT trokovicras comprehensivecharacterizationoftheembryonicfactorleutx
AT bhagatshruti comprehensivecharacterizationoftheembryonicfactorleutx
AT tervaniemimarih comprehensivecharacterizationoftheembryonicfactorleutx
AT murakawayasuhiro comprehensivecharacterizationoftheembryonicfactorleutx
AT salokaskari comprehensivecharacterizationoftheembryonicfactorleutx
AT liuxiaonan comprehensivecharacterizationoftheembryonicfactorleutx
AT miettinensini comprehensivecharacterizationoftheembryonicfactorleutx
AT burglinthomasr comprehensivecharacterizationoftheembryonicfactorleutx
AT sahubiswajyoti comprehensivecharacterizationoftheembryonicfactorleutx
AT otonkoskitimo comprehensivecharacterizationoftheembryonicfactorleutx
AT johnsonmarks comprehensivecharacterizationoftheembryonicfactorleutx
AT katayamashintaro comprehensivecharacterizationoftheembryonicfactorleutx
AT varjosalomarkku comprehensivecharacterizationoftheembryonicfactorleutx
AT kerejuha comprehensivecharacterizationoftheembryonicfactorleutx