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Comprehensive characterization of the embryonic factor LEUTX
The paired-like homeobox transcription factor LEUTX is expressed in human preimplantation embryos between the 4- and 8-cell stages, and then silenced in somatic tissues. To characterize the function of LEUTX, we performed a multiomic characterization of LEUTX using two proteomics methods and three g...
Autores principales: | , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9978639/ https://www.ncbi.nlm.nih.gov/pubmed/36876139 http://dx.doi.org/10.1016/j.isci.2023.106172 |
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author | Gawriyski, Lisa Jouhilahti, Eeva-Mari Yoshihara, Masahito Fei, Liangru Weltner, Jere Airenne, Tomi T. Trokovic, Ras Bhagat, Shruti Tervaniemi, Mari H. Murakawa, Yasuhiro Salokas, Kari Liu, Xiaonan Miettinen, Sini Bürglin, Thomas R. Sahu, Biswajyoti Otonkoski, Timo Johnson, Mark S. Katayama, Shintaro Varjosalo, Markku Kere, Juha |
author_facet | Gawriyski, Lisa Jouhilahti, Eeva-Mari Yoshihara, Masahito Fei, Liangru Weltner, Jere Airenne, Tomi T. Trokovic, Ras Bhagat, Shruti Tervaniemi, Mari H. Murakawa, Yasuhiro Salokas, Kari Liu, Xiaonan Miettinen, Sini Bürglin, Thomas R. Sahu, Biswajyoti Otonkoski, Timo Johnson, Mark S. Katayama, Shintaro Varjosalo, Markku Kere, Juha |
author_sort | Gawriyski, Lisa |
collection | PubMed |
description | The paired-like homeobox transcription factor LEUTX is expressed in human preimplantation embryos between the 4- and 8-cell stages, and then silenced in somatic tissues. To characterize the function of LEUTX, we performed a multiomic characterization of LEUTX using two proteomics methods and three genome-wide sequencing approaches. Our results show that LEUTX stably interacts with the EP300 and CBP histone acetyltransferases through its 9 amino acid transactivation domain (9aaTAD), as mutation of this domain abolishes the interactions. LEUTX targets genomic cis-regulatory sequences that overlap with repetitive elements, and through these elements it is suggested to regulate the expression of its downstream genes. We find LEUTX to be a transcriptional activator, upregulating several genes linked to preimplantation development as well as 8-cell-like markers, such as DPPA3 and ZNF280A. Our results support a role for LEUTX in preimplantation development as an enhancer binding protein and as a potent transcriptional activator. |
format | Online Article Text |
id | pubmed-9978639 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-99786392023-03-03 Comprehensive characterization of the embryonic factor LEUTX Gawriyski, Lisa Jouhilahti, Eeva-Mari Yoshihara, Masahito Fei, Liangru Weltner, Jere Airenne, Tomi T. Trokovic, Ras Bhagat, Shruti Tervaniemi, Mari H. Murakawa, Yasuhiro Salokas, Kari Liu, Xiaonan Miettinen, Sini Bürglin, Thomas R. Sahu, Biswajyoti Otonkoski, Timo Johnson, Mark S. Katayama, Shintaro Varjosalo, Markku Kere, Juha iScience Article The paired-like homeobox transcription factor LEUTX is expressed in human preimplantation embryos between the 4- and 8-cell stages, and then silenced in somatic tissues. To characterize the function of LEUTX, we performed a multiomic characterization of LEUTX using two proteomics methods and three genome-wide sequencing approaches. Our results show that LEUTX stably interacts with the EP300 and CBP histone acetyltransferases through its 9 amino acid transactivation domain (9aaTAD), as mutation of this domain abolishes the interactions. LEUTX targets genomic cis-regulatory sequences that overlap with repetitive elements, and through these elements it is suggested to regulate the expression of its downstream genes. We find LEUTX to be a transcriptional activator, upregulating several genes linked to preimplantation development as well as 8-cell-like markers, such as DPPA3 and ZNF280A. Our results support a role for LEUTX in preimplantation development as an enhancer binding protein and as a potent transcriptional activator. Elsevier 2023-02-09 /pmc/articles/PMC9978639/ /pubmed/36876139 http://dx.doi.org/10.1016/j.isci.2023.106172 Text en © 2023 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Gawriyski, Lisa Jouhilahti, Eeva-Mari Yoshihara, Masahito Fei, Liangru Weltner, Jere Airenne, Tomi T. Trokovic, Ras Bhagat, Shruti Tervaniemi, Mari H. Murakawa, Yasuhiro Salokas, Kari Liu, Xiaonan Miettinen, Sini Bürglin, Thomas R. Sahu, Biswajyoti Otonkoski, Timo Johnson, Mark S. Katayama, Shintaro Varjosalo, Markku Kere, Juha Comprehensive characterization of the embryonic factor LEUTX |
title | Comprehensive characterization of the embryonic factor LEUTX |
title_full | Comprehensive characterization of the embryonic factor LEUTX |
title_fullStr | Comprehensive characterization of the embryonic factor LEUTX |
title_full_unstemmed | Comprehensive characterization of the embryonic factor LEUTX |
title_short | Comprehensive characterization of the embryonic factor LEUTX |
title_sort | comprehensive characterization of the embryonic factor leutx |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9978639/ https://www.ncbi.nlm.nih.gov/pubmed/36876139 http://dx.doi.org/10.1016/j.isci.2023.106172 |
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