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Circular RNAs: implications of signaling pathways and bioinformatics in human cancer

Circular RNAs (circRNAs) form a class of endogenous single-stranded RNA transcripts that are widely expressed in eukaryotic cells. These RNAs mediate post-transcriptional control of gene expression and have multiple functions in biological processes, such as transcriptional regulation and splicing....

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Detalles Bibliográficos
Autores principales: Hu, Fan, Peng, Yin, Fan, Xinmin, Zhang, Xiaojing, Jin, Zhe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Compuscript 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9978890/
https://www.ncbi.nlm.nih.gov/pubmed/36861443
http://dx.doi.org/10.20892/j.issn.2095-3941.2022.0466
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author Hu, Fan
Peng, Yin
Fan, Xinmin
Zhang, Xiaojing
Jin, Zhe
author_facet Hu, Fan
Peng, Yin
Fan, Xinmin
Zhang, Xiaojing
Jin, Zhe
author_sort Hu, Fan
collection PubMed
description Circular RNAs (circRNAs) form a class of endogenous single-stranded RNA transcripts that are widely expressed in eukaryotic cells. These RNAs mediate post-transcriptional control of gene expression and have multiple functions in biological processes, such as transcriptional regulation and splicing. They serve predominantly as microRNA sponges, RNA-binding proteins, and templates for translation. More importantly, circRNAs are involved in cancer progression, and may serve as promising biomarkers for tumor diagnosis and therapy. Although traditional experimental methods are usually time-consuming and laborious, substantial progress has been made in exploring potential circRNA-disease associations by using computational models, summarized signaling pathway data, and other databases. Here, we review the biological characteristics and functions of circRNAs, including their roles in cancer. Specifically, we focus on the signaling pathways associated with carcinogenesis, and the status of circRNA-associated bioinformatics databases. Finally, we explore the potential roles of circRNAs as prognostic biomarkers in cancer.
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spelling pubmed-99788902023-03-03 Circular RNAs: implications of signaling pathways and bioinformatics in human cancer Hu, Fan Peng, Yin Fan, Xinmin Zhang, Xiaojing Jin, Zhe Cancer Biol Med Review Circular RNAs (circRNAs) form a class of endogenous single-stranded RNA transcripts that are widely expressed in eukaryotic cells. These RNAs mediate post-transcriptional control of gene expression and have multiple functions in biological processes, such as transcriptional regulation and splicing. They serve predominantly as microRNA sponges, RNA-binding proteins, and templates for translation. More importantly, circRNAs are involved in cancer progression, and may serve as promising biomarkers for tumor diagnosis and therapy. Although traditional experimental methods are usually time-consuming and laborious, substantial progress has been made in exploring potential circRNA-disease associations by using computational models, summarized signaling pathway data, and other databases. Here, we review the biological characteristics and functions of circRNAs, including their roles in cancer. Specifically, we focus on the signaling pathways associated with carcinogenesis, and the status of circRNA-associated bioinformatics databases. Finally, we explore the potential roles of circRNAs as prognostic biomarkers in cancer. Compuscript 2023-02-15 2023-03-02 /pmc/articles/PMC9978890/ /pubmed/36861443 http://dx.doi.org/10.20892/j.issn.2095-3941.2022.0466 Text en Copyright: © 2023, Cancer Biology & Medicine https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY) 4.0 (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution and reproduction in any medium, provided the original author and source are credited.
spellingShingle Review
Hu, Fan
Peng, Yin
Fan, Xinmin
Zhang, Xiaojing
Jin, Zhe
Circular RNAs: implications of signaling pathways and bioinformatics in human cancer
title Circular RNAs: implications of signaling pathways and bioinformatics in human cancer
title_full Circular RNAs: implications of signaling pathways and bioinformatics in human cancer
title_fullStr Circular RNAs: implications of signaling pathways and bioinformatics in human cancer
title_full_unstemmed Circular RNAs: implications of signaling pathways and bioinformatics in human cancer
title_short Circular RNAs: implications of signaling pathways and bioinformatics in human cancer
title_sort circular rnas: implications of signaling pathways and bioinformatics in human cancer
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9978890/
https://www.ncbi.nlm.nih.gov/pubmed/36861443
http://dx.doi.org/10.20892/j.issn.2095-3941.2022.0466
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