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Prognostic prediction of lung adenocarcinoma by integrative analysis of RHOH expression and methylation
BACKGROUND AND OBJECTIVE: The development of epigenetics holds great promise for diagnosis and treatment of lung adenocarcinoma (LUAD). The purpose of this work was to analyze the correlation between Ras Homolog Gene Family Member H (RHOH) expression and methylation in patients with LUAD and its ass...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9978903/ https://www.ncbi.nlm.nih.gov/pubmed/36710485 http://dx.doi.org/10.1111/crj.13574 |
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author | Kuang, Muyu Zhou, Zhenhua Lu, Zhongyuan Shen, Weina Ge, Haiyan Tao, Xiaoting Zhao, Yue Zhuge, Lingdun Sun, Yihua Ji, Dongmei Zhang, Huibiao |
author_facet | Kuang, Muyu Zhou, Zhenhua Lu, Zhongyuan Shen, Weina Ge, Haiyan Tao, Xiaoting Zhao, Yue Zhuge, Lingdun Sun, Yihua Ji, Dongmei Zhang, Huibiao |
author_sort | Kuang, Muyu |
collection | PubMed |
description | BACKGROUND AND OBJECTIVE: The development of epigenetics holds great promise for diagnosis and treatment of lung adenocarcinoma (LUAD). The purpose of this work was to analyze the correlation between Ras Homolog Gene Family Member H (RHOH) expression and methylation in patients with LUAD and its association with survival. METHODS: Data related to gene expression, DNA methylation, and clinical features of LUAD from The Cancer Genome Atlas (TCGA) database were analyzed. A total of 50 patients were included in verification group. The methylation level of RHOH in verification group was detected by bisulfite amplicon sequencing. RESULTS: The RHOH methylation level in TCGA cohort was significantly and negatively correlated with its expression level (Cor = −0.5, p = 2.687e−33). Patients with hypermethylation and low expression of RHOH had significantly worse prognosis than patients with hypomethylation and low expression of RHOH (TCGA: p = 0.004; validation cohort: p = 0.006, HR: 4.740, 95% CI: 1.567–14.340). CONCLUSION: Our research revealed that RHOH may prove to be a new potential prognostic predictor for LUAD patients. |
format | Online Article Text |
id | pubmed-9978903 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-99789032023-03-03 Prognostic prediction of lung adenocarcinoma by integrative analysis of RHOH expression and methylation Kuang, Muyu Zhou, Zhenhua Lu, Zhongyuan Shen, Weina Ge, Haiyan Tao, Xiaoting Zhao, Yue Zhuge, Lingdun Sun, Yihua Ji, Dongmei Zhang, Huibiao Clin Respir J Original Articles BACKGROUND AND OBJECTIVE: The development of epigenetics holds great promise for diagnosis and treatment of lung adenocarcinoma (LUAD). The purpose of this work was to analyze the correlation between Ras Homolog Gene Family Member H (RHOH) expression and methylation in patients with LUAD and its association with survival. METHODS: Data related to gene expression, DNA methylation, and clinical features of LUAD from The Cancer Genome Atlas (TCGA) database were analyzed. A total of 50 patients were included in verification group. The methylation level of RHOH in verification group was detected by bisulfite amplicon sequencing. RESULTS: The RHOH methylation level in TCGA cohort was significantly and negatively correlated with its expression level (Cor = −0.5, p = 2.687e−33). Patients with hypermethylation and low expression of RHOH had significantly worse prognosis than patients with hypomethylation and low expression of RHOH (TCGA: p = 0.004; validation cohort: p = 0.006, HR: 4.740, 95% CI: 1.567–14.340). CONCLUSION: Our research revealed that RHOH may prove to be a new potential prognostic predictor for LUAD patients. John Wiley and Sons Inc. 2023-01-29 /pmc/articles/PMC9978903/ /pubmed/36710485 http://dx.doi.org/10.1111/crj.13574 Text en © 2023 The Authors. The Clinical Respiratory Journal published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Kuang, Muyu Zhou, Zhenhua Lu, Zhongyuan Shen, Weina Ge, Haiyan Tao, Xiaoting Zhao, Yue Zhuge, Lingdun Sun, Yihua Ji, Dongmei Zhang, Huibiao Prognostic prediction of lung adenocarcinoma by integrative analysis of RHOH expression and methylation |
title | Prognostic prediction of lung adenocarcinoma by integrative analysis of RHOH expression and methylation |
title_full | Prognostic prediction of lung adenocarcinoma by integrative analysis of RHOH expression and methylation |
title_fullStr | Prognostic prediction of lung adenocarcinoma by integrative analysis of RHOH expression and methylation |
title_full_unstemmed | Prognostic prediction of lung adenocarcinoma by integrative analysis of RHOH expression and methylation |
title_short | Prognostic prediction of lung adenocarcinoma by integrative analysis of RHOH expression and methylation |
title_sort | prognostic prediction of lung adenocarcinoma by integrative analysis of rhoh expression and methylation |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9978903/ https://www.ncbi.nlm.nih.gov/pubmed/36710485 http://dx.doi.org/10.1111/crj.13574 |
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