Cargando…
m(6)A RNA methylation regulators predict prognosis and indicate characteristics of tumour microenvironment infiltration in acute myeloid leukaemia
Patients with acute myeloid leukaemia (AML) have poor prognoses and low overall survival (OS) rates owing to its heterogeneity and the complexity of its tumour microenvironment (TME). N6-methyladenosine (m(6)A) modification plays a key role in the initiation and progression of haematopoietic maligna...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9980463/ https://www.ncbi.nlm.nih.gov/pubmed/36567510 http://dx.doi.org/10.1080/15592294.2022.2160134 |
_version_ | 1784899919092383744 |
---|---|
author | Liao, Xinai Chen, Ling Liu, Jingru Hu, Haoran Hou, Diyu You, Ruolan Wang, Xiaoting Huang, Huifang |
author_facet | Liao, Xinai Chen, Ling Liu, Jingru Hu, Haoran Hou, Diyu You, Ruolan Wang, Xiaoting Huang, Huifang |
author_sort | Liao, Xinai |
collection | PubMed |
description | Patients with acute myeloid leukaemia (AML) have poor prognoses and low overall survival (OS) rates owing to its heterogeneity and the complexity of its tumour microenvironment (TME). N6-methyladenosine (m(6)A) modification plays a key role in the initiation and progression of haematopoietic malignancies. However, the underlying function of m(6)A regulators in AML remains elusive. This study thoroughly analysed the m(6)A modification features of 177 AML patients based on 22 m(6)A regulators. Utilizing unsupervised clustering, we determined three distinct m(6)A modification patterns related to different biological functions, TME cell-infiltrating characteristics and clinical outcomes. Additionally, a risk score was constructed based on six m(6)A regulators-associated prognostic signatures and was validated as an independent and valuable prognostic factor for AML. Patients with a low-risk score exhibited better survival than those with a high-risk score. Many m(6)A regulators were aberrantly expressed in AML, among which METTL14, YTHDC2, ZC3H13 and RBM15 were observed to be associated with the OS of AML. In addition, these four m(6)A regulators were found to be noticeably related to the immune checkpoint inhibitor (ICI) treatments. Finally, we verified the expression levels of these four m(6)A regulators in AML and healthy samples and three groups of AML patients with different risk categories. Collectively, our study indicates that the m(6)A modification pattern is involved in TME immune-infiltrating characteristics and prognosis in AML. A better understanding of the m(6)A modification pattern will help enhance our knowledge of the molecular mechanisms of AML and develop potential prognosis prediction indicators and more effective immunotherapeutic strategies. |
format | Online Article Text |
id | pubmed-9980463 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-99804632023-03-03 m(6)A RNA methylation regulators predict prognosis and indicate characteristics of tumour microenvironment infiltration in acute myeloid leukaemia Liao, Xinai Chen, Ling Liu, Jingru Hu, Haoran Hou, Diyu You, Ruolan Wang, Xiaoting Huang, Huifang Epigenetics Research Paper Patients with acute myeloid leukaemia (AML) have poor prognoses and low overall survival (OS) rates owing to its heterogeneity and the complexity of its tumour microenvironment (TME). N6-methyladenosine (m(6)A) modification plays a key role in the initiation and progression of haematopoietic malignancies. However, the underlying function of m(6)A regulators in AML remains elusive. This study thoroughly analysed the m(6)A modification features of 177 AML patients based on 22 m(6)A regulators. Utilizing unsupervised clustering, we determined three distinct m(6)A modification patterns related to different biological functions, TME cell-infiltrating characteristics and clinical outcomes. Additionally, a risk score was constructed based on six m(6)A regulators-associated prognostic signatures and was validated as an independent and valuable prognostic factor for AML. Patients with a low-risk score exhibited better survival than those with a high-risk score. Many m(6)A regulators were aberrantly expressed in AML, among which METTL14, YTHDC2, ZC3H13 and RBM15 were observed to be associated with the OS of AML. In addition, these four m(6)A regulators were found to be noticeably related to the immune checkpoint inhibitor (ICI) treatments. Finally, we verified the expression levels of these four m(6)A regulators in AML and healthy samples and three groups of AML patients with different risk categories. Collectively, our study indicates that the m(6)A modification pattern is involved in TME immune-infiltrating characteristics and prognosis in AML. A better understanding of the m(6)A modification pattern will help enhance our knowledge of the molecular mechanisms of AML and develop potential prognosis prediction indicators and more effective immunotherapeutic strategies. Taylor & Francis 2022-12-25 /pmc/articles/PMC9980463/ /pubmed/36567510 http://dx.doi.org/10.1080/15592294.2022.2160134 Text en © 2023 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Paper Liao, Xinai Chen, Ling Liu, Jingru Hu, Haoran Hou, Diyu You, Ruolan Wang, Xiaoting Huang, Huifang m(6)A RNA methylation regulators predict prognosis and indicate characteristics of tumour microenvironment infiltration in acute myeloid leukaemia |
title | m(6)A RNA methylation regulators predict prognosis and indicate characteristics of tumour microenvironment infiltration in acute myeloid leukaemia |
title_full | m(6)A RNA methylation regulators predict prognosis and indicate characteristics of tumour microenvironment infiltration in acute myeloid leukaemia |
title_fullStr | m(6)A RNA methylation regulators predict prognosis and indicate characteristics of tumour microenvironment infiltration in acute myeloid leukaemia |
title_full_unstemmed | m(6)A RNA methylation regulators predict prognosis and indicate characteristics of tumour microenvironment infiltration in acute myeloid leukaemia |
title_short | m(6)A RNA methylation regulators predict prognosis and indicate characteristics of tumour microenvironment infiltration in acute myeloid leukaemia |
title_sort | m(6)a rna methylation regulators predict prognosis and indicate characteristics of tumour microenvironment infiltration in acute myeloid leukaemia |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9980463/ https://www.ncbi.nlm.nih.gov/pubmed/36567510 http://dx.doi.org/10.1080/15592294.2022.2160134 |
work_keys_str_mv | AT liaoxinai m6arnamethylationregulatorspredictprognosisandindicatecharacteristicsoftumourmicroenvironmentinfiltrationinacutemyeloidleukaemia AT chenling m6arnamethylationregulatorspredictprognosisandindicatecharacteristicsoftumourmicroenvironmentinfiltrationinacutemyeloidleukaemia AT liujingru m6arnamethylationregulatorspredictprognosisandindicatecharacteristicsoftumourmicroenvironmentinfiltrationinacutemyeloidleukaemia AT huhaoran m6arnamethylationregulatorspredictprognosisandindicatecharacteristicsoftumourmicroenvironmentinfiltrationinacutemyeloidleukaemia AT houdiyu m6arnamethylationregulatorspredictprognosisandindicatecharacteristicsoftumourmicroenvironmentinfiltrationinacutemyeloidleukaemia AT youruolan m6arnamethylationregulatorspredictprognosisandindicatecharacteristicsoftumourmicroenvironmentinfiltrationinacutemyeloidleukaemia AT wangxiaoting m6arnamethylationregulatorspredictprognosisandindicatecharacteristicsoftumourmicroenvironmentinfiltrationinacutemyeloidleukaemia AT huanghuifang m6arnamethylationregulatorspredictprognosisandindicatecharacteristicsoftumourmicroenvironmentinfiltrationinacutemyeloidleukaemia |