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A new immune checkpoint-associated nine-gene signature for prognostic prediction of glioblastoma

Glioblastoma (GBM) is a highly malignant neurological tumor that has a poor prognosis. While pyroptosis affects cancer cell proliferation, invasion and migration, function of pyroptosis-related genes (PRGs) in GBM as well as the prognostic significance of PRGs remain obscure. By analyzing the mechan...

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Autores principales: Jin, Xiao, Zhao, Xiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Lippincott Williams & Wilkins 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9981394/
https://www.ncbi.nlm.nih.gov/pubmed/36862886
http://dx.doi.org/10.1097/MD.0000000000033150
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author Jin, Xiao
Zhao, Xiang
author_facet Jin, Xiao
Zhao, Xiang
author_sort Jin, Xiao
collection PubMed
description Glioblastoma (GBM) is a highly malignant neurological tumor that has a poor prognosis. While pyroptosis affects cancer cell proliferation, invasion and migration, function of pyroptosis-related genes (PRGs) in GBM as well as the prognostic significance of PRGs remain obscure. By analyzing the mechanisms involved in the association between pyroptosis and GBM, our study hopes to provide new insights into the treatment of GBM. Here, 32 out of 52 PRGs were identified as the differentially expressed genes between GBM tumor versus normal tissues. And all GBM cases were assigned to 2 groups according to the expression of the differentially expressed genes using comprehensive bioinformatics analysis. The least absolute shrinkage and selection operator analysis led to the construction of a 9-gene signature, and the cancer genome atlas cohort of GBM patients were categorized into high risk and low risk subgroups. A significant increase in the survival possibility was found in low risk patients in comparison with the high risk ones. Consistently, low risk patients of a gene expression omnibus cohort displayed a markedly longer overall survival than the high risk counterparts. The risk score calculated using the gene signature was found to be an independent predictor of survival of GBM cases. Besides, we observed significant differences in the expression levels of immune checkpoints between the high risk versus low risk GBM cases, providing instructive suggestions for immunotherapy of GBM. Overall, the present study developed a new multigene signature for prognostic prediction of GBM.
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spelling pubmed-99813942023-03-04 A new immune checkpoint-associated nine-gene signature for prognostic prediction of glioblastoma Jin, Xiao Zhao, Xiang Medicine (Baltimore) 5700 Glioblastoma (GBM) is a highly malignant neurological tumor that has a poor prognosis. While pyroptosis affects cancer cell proliferation, invasion and migration, function of pyroptosis-related genes (PRGs) in GBM as well as the prognostic significance of PRGs remain obscure. By analyzing the mechanisms involved in the association between pyroptosis and GBM, our study hopes to provide new insights into the treatment of GBM. Here, 32 out of 52 PRGs were identified as the differentially expressed genes between GBM tumor versus normal tissues. And all GBM cases were assigned to 2 groups according to the expression of the differentially expressed genes using comprehensive bioinformatics analysis. The least absolute shrinkage and selection operator analysis led to the construction of a 9-gene signature, and the cancer genome atlas cohort of GBM patients were categorized into high risk and low risk subgroups. A significant increase in the survival possibility was found in low risk patients in comparison with the high risk ones. Consistently, low risk patients of a gene expression omnibus cohort displayed a markedly longer overall survival than the high risk counterparts. The risk score calculated using the gene signature was found to be an independent predictor of survival of GBM cases. Besides, we observed significant differences in the expression levels of immune checkpoints between the high risk versus low risk GBM cases, providing instructive suggestions for immunotherapy of GBM. Overall, the present study developed a new multigene signature for prognostic prediction of GBM. Lippincott Williams & Wilkins 2023-03-03 /pmc/articles/PMC9981394/ /pubmed/36862886 http://dx.doi.org/10.1097/MD.0000000000033150 Text en Copyright © 2023 the Author(s). Published by Wolters Kluwer Health, Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License 4.0 (CCBY) (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle 5700
Jin, Xiao
Zhao, Xiang
A new immune checkpoint-associated nine-gene signature for prognostic prediction of glioblastoma
title A new immune checkpoint-associated nine-gene signature for prognostic prediction of glioblastoma
title_full A new immune checkpoint-associated nine-gene signature for prognostic prediction of glioblastoma
title_fullStr A new immune checkpoint-associated nine-gene signature for prognostic prediction of glioblastoma
title_full_unstemmed A new immune checkpoint-associated nine-gene signature for prognostic prediction of glioblastoma
title_short A new immune checkpoint-associated nine-gene signature for prognostic prediction of glioblastoma
title_sort new immune checkpoint-associated nine-gene signature for prognostic prediction of glioblastoma
topic 5700
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9981394/
https://www.ncbi.nlm.nih.gov/pubmed/36862886
http://dx.doi.org/10.1097/MD.0000000000033150
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