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High expression of HILPDA is an adverse prognostic prognostic factor in hepatocellular carcinoma
Hepatocellular carcinoma (LIHC) is a malignant tumor arising from hepatocytes or intrahepatic bile duct epithelial cells, which is one of the common malignancies worldwide. Better identification of liver cancer biomarkers has become one of the current challenges. Although hypoxia inducible lipid dro...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Lippincott Williams & Wilkins
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9981432/ https://www.ncbi.nlm.nih.gov/pubmed/36862910 http://dx.doi.org/10.1097/MD.0000000000033145 |
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author | Wang, Xiao Zou, Aoshuang Zhang, Jinhe Gao, Guochuan Shan, Wenting Li, Jun Liu, Xia |
author_facet | Wang, Xiao Zou, Aoshuang Zhang, Jinhe Gao, Guochuan Shan, Wenting Li, Jun Liu, Xia |
author_sort | Wang, Xiao |
collection | PubMed |
description | Hepatocellular carcinoma (LIHC) is a malignant tumor arising from hepatocytes or intrahepatic bile duct epithelial cells, which is one of the common malignancies worldwide. Better identification of liver cancer biomarkers has become one of the current challenges. Although hypoxia inducible lipid droplet associated (HILPDA) has been reported to be associated with tumor progression in a variety of human solid cancers, it has rarely been reported in the field of hepatocellular carcinoma; therefore, in this paper, RNA sequencing data from TCGA were used to analyze the expression of HILPDA and differentially expressed genes (DEGs). In addition, functional enrichment analysis of HILPDA-associated DEGs was performed by GO/KEGG, GSEA, immune cell infiltration analysis and protein-protein interaction network. The clinical significance of HILPDA in LIHC was calculated by Kaplan–Meier Cox regression and prognostic nomogram models. R package was used to analyze the combined studies. Thus, HILPDA was highly expressed in various malignancies, including LIHC, compared with normal samples, and high HILPDA expression was associated with poor prognosis (P < .05). Cox regression analysis showed high HILPDA to be an independent prognostic factor; age and cytogenetic risk were included in the nomogram prognostic model. A total of 1294 DEGs were identified between the high and low expression groups, of which 1169 had upregulated gene expression and 125 had downregulated gene expression. Overall, high expression of HILPDA is a potential biomarker for poor outcome in LIHC. |
format | Online Article Text |
id | pubmed-9981432 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Lippincott Williams & Wilkins |
record_format | MEDLINE/PubMed |
spelling | pubmed-99814322023-03-04 High expression of HILPDA is an adverse prognostic prognostic factor in hepatocellular carcinoma Wang, Xiao Zou, Aoshuang Zhang, Jinhe Gao, Guochuan Shan, Wenting Li, Jun Liu, Xia Medicine (Baltimore) 5700 Hepatocellular carcinoma (LIHC) is a malignant tumor arising from hepatocytes or intrahepatic bile duct epithelial cells, which is one of the common malignancies worldwide. Better identification of liver cancer biomarkers has become one of the current challenges. Although hypoxia inducible lipid droplet associated (HILPDA) has been reported to be associated with tumor progression in a variety of human solid cancers, it has rarely been reported in the field of hepatocellular carcinoma; therefore, in this paper, RNA sequencing data from TCGA were used to analyze the expression of HILPDA and differentially expressed genes (DEGs). In addition, functional enrichment analysis of HILPDA-associated DEGs was performed by GO/KEGG, GSEA, immune cell infiltration analysis and protein-protein interaction network. The clinical significance of HILPDA in LIHC was calculated by Kaplan–Meier Cox regression and prognostic nomogram models. R package was used to analyze the combined studies. Thus, HILPDA was highly expressed in various malignancies, including LIHC, compared with normal samples, and high HILPDA expression was associated with poor prognosis (P < .05). Cox regression analysis showed high HILPDA to be an independent prognostic factor; age and cytogenetic risk were included in the nomogram prognostic model. A total of 1294 DEGs were identified between the high and low expression groups, of which 1169 had upregulated gene expression and 125 had downregulated gene expression. Overall, high expression of HILPDA is a potential biomarker for poor outcome in LIHC. Lippincott Williams & Wilkins 2023-03-03 /pmc/articles/PMC9981432/ /pubmed/36862910 http://dx.doi.org/10.1097/MD.0000000000033145 Text en Copyright © 2023 the Author(s). Published by Wolters Kluwer Health, Inc. https://creativecommons.org/licenses/by-nc/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution-Non Commercial License 4.0 (CCBY-NC) (https://creativecommons.org/licenses/by-nc/4.0/) , where it is permissible to download, share, remix, transform, and buildup the work provided it is properly cited. The work cannot be used commercially without permission from the journal. |
spellingShingle | 5700 Wang, Xiao Zou, Aoshuang Zhang, Jinhe Gao, Guochuan Shan, Wenting Li, Jun Liu, Xia High expression of HILPDA is an adverse prognostic prognostic factor in hepatocellular carcinoma |
title | High expression of HILPDA is an adverse prognostic prognostic factor in hepatocellular carcinoma |
title_full | High expression of HILPDA is an adverse prognostic prognostic factor in hepatocellular carcinoma |
title_fullStr | High expression of HILPDA is an adverse prognostic prognostic factor in hepatocellular carcinoma |
title_full_unstemmed | High expression of HILPDA is an adverse prognostic prognostic factor in hepatocellular carcinoma |
title_short | High expression of HILPDA is an adverse prognostic prognostic factor in hepatocellular carcinoma |
title_sort | high expression of hilpda is an adverse prognostic prognostic factor in hepatocellular carcinoma |
topic | 5700 |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9981432/ https://www.ncbi.nlm.nih.gov/pubmed/36862910 http://dx.doi.org/10.1097/MD.0000000000033145 |
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